RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ALG10Q5BKT4 473 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 PABPC1L2AQ5JQF8 200 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 ELFN2Q5R3F8 820 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 ARMC4Q5T2S8 1044 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 CPLX4Q7Z7G2 160 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 AKR7LQ8NHP1 331 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 RP9Q8TA86 221 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 LZICQ8WZA0 190 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 YIPF5Q969M3 257 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 BPIFA2Q96DR5 249 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 FNDC11Q9BVV2 318 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 POLR2J2Q9GZM3 115 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 POLR2J3Q9H1A7 115 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 KCNN2Q9H2S1 579 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 TXNIPQ9H3M7 391 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 CCNB1IP1Q9NPC3 277 aa9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF346Q9UL40 294 aaKnown RBP9.69□□□□□ -0.86
NIPAL3-207ENST00000488155 NME4O00746 187 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 WNT9BO14905 357 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 CDC14BO60729 498 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 ENTPD5O75356 428 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 IFNW1P05000 195 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 MMP7P09237 267 aaPredicted RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 TACSTD2P09758 323 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 THRBP10828 461 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 NCK1P16333 377 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF32P17041 273 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 APLNRP35414 380 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 GPR4P46093 362 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 GPR6P46095 362 aaPredicted RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 UCP2P55851 309 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 RPL27P61353 136 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 ERVK-25P63136 954 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 TRAM2Q15035 370 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 SPATA46Q5T0L3 261 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 C10orf128Q5T292 105 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC25A47Q6Q0C1 308 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 TBPL2Q6SJ96 375 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 FKBP9P1Q75LS8 142 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 HDDC2Q7Z4H3 204 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 TREML1Q86YW5 311 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 CPEB3Q8NE35 698 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 OR1J2Q8NGS2 313 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 OR1J1Q8NGS3 322 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 SYNPRQ8TBG9 265 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 C11orf40Q8WZ69 217 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 GTF3AQ92664 365 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 FAM107BQ9H098 131 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 NSRP1Q9H0G5 558 aaKnown RBP9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 LRMDAQ9H2I8 198 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 CCDC134Q9H6E4 229 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 SIAEQ9HAT2 523 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 LPAR2Q9HBW0 351 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 MAN2C1Q9NTJ4 1040 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 HIF3AQ9Y2N7 669 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 UGT2A1Q9Y4X1 527 aa9.68□□□□□ -0.86
NIPAL3-207ENST00000488155 STAB1Q9NY15 2570 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 A0A1W2PPL8 197 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 SLC22A23A1A5C7 686 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 EFCAB9A8MZ26 197 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 H7C1C5 153 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 FFAR1O14842 300 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 TPD52L2O43399 206 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 PPIHO43447 177 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 MGRN1O60291 552 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 SERPINA1P01009 418 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 PTHP01270 115 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 IGF2P01344 180 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 TSPAN19P0C672 248 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 HNF1AP20823 631 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 STOMP27105 288 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 GSK3BP49841 420 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 NUDT2P50583 147 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF133P52736 654 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 KLF3P57682 345 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 SELENOVP59797 346 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 LCN6P62502 163 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 CCL8P80075 99 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 MRPS34P82930 218 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 TSTQ16762 297 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 IFI44LQ53G44 452 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF730Q6ZMV8 503 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 RINLQ6ZS11 566 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 ARPINQ7Z6K5 226 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 OFCC1Q8IZS5 231 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 LINC01356Q8N9X3 169 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 OR13C2Q8NGS9 318 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 CLDND2Q8NHS1 167 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 LIPHQ8WWY8 451 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 RDH5Q92781 318 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 FAM162AQ96A26 154 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 NABP1Q96AH0 204 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 NMD3Q96D46 503 aaKnown RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 HSH2DQ96JZ2 352 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 RBP7Q96R05 134 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 SEPHS2Q99611 448 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 C1orf198Q9H425 327 aa9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 ZNF275Q9NSD4 429 aaPredicted RBP9.67□□□□□ -0.86
NIPAL3-207ENST00000488155 TREM2Q9NZC2 230 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms