RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NUTF2P61970 127 aaKnown RBP2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ACTA2P62736 377 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ACTG2P63267 376 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ACTC1P68032 377 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 REG3AQ06141 175 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 XKR7Q5GH72 579 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ANKRD22Q5VYY1 191 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ANKRD26P1Q6NSI1 321 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 NANOGP8Q6NSW7 305 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 LYPD2Q6UXB3 125 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CTAGE6Q86UF2 777 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIR2DL5AQ8N109 375 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 KIR2DL5BQ8NHK3 375 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF596Q8TC21 504 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC7A13Q8TCU3 470 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC38A4Q969I6 547 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 NTAN1Q96AB6 310 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CREB3L1Q96BA8 519 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 TM4SF18Q96CE8 201 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 SERPINB12Q96P63 405 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 NDFIP1Q9BT67 221 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC25A2Q9BXI2 301 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM192AQ9GZU8 254 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 NOX3Q9HBY0 568 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 RBAKQ9NYW8 714 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 CTSFQ9UBX1 484 aa2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 PRG3Q9Y2Y8 225 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 MTCL1Q9Y4B5 1905 aaKnown RBP2.38□□□□□ -2.03
HMGB1P36-201ENST00000487709 NACAE9PAV3 2078 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGHV3-74A0A0B4J1X5 117 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGKV1D-13A0A0B4J2D9 117 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 GLYATL1P3A0A0U1RQE8 302 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 LYRM9A8MSI8 78 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 RNF13O43567 381 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 GABARAPO95166 117 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 FGFR1OPO95684 399 aaKnown RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGKV1-13P0DP09 117 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAB3BP20337 219 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 HRH1P35367 487 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 NAA10P41227 235 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC1A1P43005 524 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 NCBP2P52298 156 aaKnown RBP eCLIP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 VSX2P58304 361 aaPredicted RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAP1AP62834 184 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 EBI3Q14213 229 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 PTGES3Q15185 160 aaKnown RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 SF3A2Q15428 464 aaKnown RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 DEFB116Q30KQ4 102 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 CARD17Q5XLA6 110 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 SLC8B1Q6J4K2 584 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZFP2Q6ZN57 461 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 FAM92BQ6ZTR7 304 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 C12orf56Q8IXR9 622 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR7G2Q8NG99 324 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 OR4C5Q8NGB2 326 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF502Q8TBZ5 544 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZFP90Q8TF47 636 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 MCUR1Q96AQ8 359 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 DNAJC1Q96KC8 554 aaKnown RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 ATP5SQ99766 215 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 UGT1A7Q9HAW7 530 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 UGT1A10Q9HAW8 530 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 UGT1A8Q9HAW9 530 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 KCNJ16Q9NPI9 418 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 UVRAGQ9P2Y5 699 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 CTNNA3Q9UI47 895 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 LSM7Q9UK45 103 aaKnown RBP2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 MROH7-TTC4A0A0A0MT08 1334 aa2.37□□□□□ -2.03
HMGB1P36-201ENST00000487709 IGHV5-51A0A0C4DH38 117 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 PLAC8L1A1L4L8 177 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 H7C0C1 242 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAB29O14966 203 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 BET1O15155 118 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CLOCKO15516 846 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CD5LO43866 347 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 VAMP5O95183 116 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CLIC3O95833 236 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 ANXA5P08758 320 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 PRPS2P11908 318 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 PSMC3P17980 439 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 PBLDP30039 288 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 GDI1P31150 447 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 HNRNPH3P31942 346 aaKnown RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 TAGLN2P37802 199 aaKnown RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 ATP5OP48047 213 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 TMED10P49755 219 aaKnown RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF136P52737 540 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CRISP3P54108 245 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CDH6P55285 790 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 RGS8P57771 180 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 RAB10P61026 200 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 QPRTQ15274 297 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 RCN1Q15293 331 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 KHDRBS2Q5VWX1 349 aaKnown RBP2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 TTC23LQ6PF05 361 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CERS6Q6ZMG9 384 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 ZNF836Q6ZNA1 936 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 TEX43Q6ZNM6 134 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 MS4A15Q8N5U1 240 aa2.36□□□□□ -2.03
HMGB1P36-201ENST00000487709 CYB561D1Q8N8Q1 229 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms