RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 APOBEC3BQ9UH17 382 aaKnown RBP9.65□□□□□ -0.86
CCDC171-208ENST00000486641 CCL26Q9Y258 94 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 ENTPD2Q9Y5L3 495 aa9.65□□□□□ -0.86
CCDC171-208ENST00000486641 C13orf42A0A1B0GVH6 325 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 A6NLC8 198 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF736B4DX44 427 aaPredicted RBP9.65□□□□□ -0.87
CCDC171-208ENST00000486641 PHYHO14832 338 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 AGPAT2O15120 278 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 GLCEO94923 617 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 CD5P06127 495 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 CRHP06850 196 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ACKR3P25106 362 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 HTR5AP47898 357 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 CSNK1EP49674 416 aaKnown RBP9.65□□□□□ -0.87
CCDC171-208ENST00000486641 FKBP1BP68106 108 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 BTN3A2P78410 334 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 IL13RA1P78552 427 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 PNLIPRP3Q17RR3 467 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 FAM76BQ5HYJ3 339 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 DHRS11Q6UWP2 260 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 FAM220AQ7Z4H9 259 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 NPAS4Q8IUM7 802 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF595Q8IYB9 648 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 LRRC25Q8N386 305 aaPredicted RBP9.65□□□□□ -0.87
CCDC171-208ENST00000486641 OR4S1Q8NGB4 309 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 CASTOR1Q8WTX7 329 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ISOC2Q96AB3 205 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 AKR1E2Q96JD6 320 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 TSSK2Q96PF2 358 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF426Q9BUY5 554 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 ALG12Q9BV10 488 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 TEX101Q9BY14 249 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 TMPRSS5Q9H3S3 457 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 CHMP1AQ9HD42 196 aaPredicted RBP9.65□□□□□ -0.87
CCDC171-208ENST00000486641 TMED7Q9Y3B3 224 aa9.65□□□□□ -0.87
CCDC171-208ENST00000486641 LOC100289279A0A1B0GTE1 492 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 C5orf51A6NDU8 294 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 OR4C45A6NMZ5 311 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 C1QTNF3-AMACRE9PGA6 284 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 NPIPB9F8W1W9 429 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 GPR37O15354 613 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 CD1CP29017 333 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 CTGFP29279 349 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 CD80P33681 288 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 VASPP50552 380 aaPredicted RBP9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SKP1P63208 163 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SGCAQ16586 387 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 NCMAPQ5T1S8 102 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 TMPPEQ6ZT21 453 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF676Q8N7Q3 588 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ZNF614Q8N883 585 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ZSCAN4Q8NAM6 433 aaPredicted RBP9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SLC39A7Q92504 469 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 MRGPRFQ96AM1 343 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SMIM8Q96KF7 97 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 PHB2Q99623 299 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SULT4A1Q9BR01 284 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ASH2LQ9UBL3 628 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SCN2AQ99250 2005 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 hCG_1809904A0A1W2PP81 198 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1W2PPC1 479 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1W2PR64 198 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1W2PRV1 198 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 FAM157AC9JC47 383 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 H0YIZ8 118 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 AP4M1O00189 453 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 VEGFDO43915 354 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 LDB3O75112 727 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ABHD16AO95870 558 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 CYB5AP00167 134 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 AK1P00568 194 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 IL2RAP01589 272 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 FCGR3AP08637 254 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 C6P13671 934 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 LAP3P28838 519 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 LPAR6P43657 344 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 P2RY4P51582 365 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 HTRA3P83110 453 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 DEFA6Q01524 100 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ELOCQ15369 112 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 RAB11BQ15907 218 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 TCTN1Q2MV58 587 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ALG10BQ5I7T1 473 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 METRNLQ641Q3 311 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ZAR1Q86SH2 424 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SLC43A2Q8N370 569 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 OR2G2Q8NGZ5 317 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 SOCS4Q8WXH5 440 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 MCHR2Q969V1 340 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 TOX2Q96NM4 488 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 ADAP2Q9NPF8 381 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 OR2S2Q9NQN1 319 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 TIMM10BQ9Y5J6 103 aa9.64□□□□□ -0.87
CCDC171-208ENST00000486641 PRRC2BQ5JSZ5 2229 aaKnown RBP9.63□□□□□ -0.87
CCDC171-208ENST00000486641 TRBV6-7A0A0A0MS04 114 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1B0GV90 55 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1W2PPH5 198 aa9.63□□□□□ -0.87
CCDC171-208ENST00000486641 A0A1W2PRU2 124 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms