RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 CANT1Q8WVQ1 401 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 RASD2Q96D21 266 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 MS4A3Q96HJ5 214 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 CHID1Q9BWS9 393 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 SIAEQ9HAT2 523 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 CA10Q9NS85 328 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 CBLN4Q9NTU7 201 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 VNN3Q9NY84 501 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 SLC7A8Q9UHI5 535 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 SAMHD1Q9Y3Z3 626 aaKnown RBP15.79■□□□□ 0.12
COL1A1-207ENST00000486572 IER3IP1Q9Y5U9 82 aa15.79■□□□□ 0.12
COL1A1-207ENST00000486572 HIVEP1P15822 2718 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 SLC22A23A1A5C7 686 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 PRSS37A4D1T9 235 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 TXNDC12O95881 172 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 APEHP13798 732 aaKnown RBP15.78■□□□□ 0.12
COL1A1-207ENST00000486572 SLC6A6P31641 620 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 APOBEC3AP31941 199 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-207ENST00000486572 CDKN1AP38936 164 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 GK3PQ14409 553 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 RFX4Q33E94 735 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 C11orf71Q6IPW1 123 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 ZNF770Q6IQ21 691 aaPredicted RBP15.78■□□□□ 0.12
COL1A1-207ENST00000486572 TMEM53Q6P2H8 277 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 ZNF620Q6ZNG0 422 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 LRRC18Q8N456 261 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 WFDC11Q8NEX6 87 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 NUP37Q8NFH4 326 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 NABP1Q96AH0 204 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 TRMT61AQ96FX7 289 aaKnown RBP15.78■□□□□ 0.12
COL1A1-207ENST00000486572 KCNN2Q9H2S1 579 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 HEATR1Q9H583 2144 aaKnown RBP15.78■□□□□ 0.12
COL1A1-207ENST00000486572 RNF121Q9H920 327 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 U3KQV3 271 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 F8P00451 2351 aa15.78■□□□□ 0.12
COL1A1-207ENST00000486572 SOCS2O14508 198 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 PPP1R3DO95685 299 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 CST1P01037 141 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 SERPINA5P05154 406 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
COL1A1-207ENST00000486572 ATP5J2P56134 94 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 HGFACQ04756 655 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 PPP1R8Q12972 351 aaKnown RBP15.77■□□□□ 0.12
COL1A1-207ENST00000486572 RAB39AQ14964 217 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 SGCAQ16586 387 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 PRSS57Q6UWY2 283 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 FOXL2NBQ6ZUU3 175 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 ZNF584Q8IVC4 421 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 ERMAPQ96PL5 475 aaPredicted RBP15.77■□□□□ 0.12
COL1A1-207ENST00000486572 IFT27Q9BW83 186 aa15.77■□□□□ 0.12
COL1A1-207ENST00000486572 MAP1AP78559 2803 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-207ENST00000486572 A0A1W2PPL8 197 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 TCRBV3S1A0A5B6 114 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 IMPA2O14732 288 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 ARPC3O15145 178 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 MICAQ29983 383 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 FAM27BQ5VT28 67 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 RPL13AP3Q6NVV1 102 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 YTHDF3Q7Z739 585 aaKnown RBP15.76■□□□□ 0.11
COL1A1-207ENST00000486572 AQP11Q8NBQ7 271 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 SAMD8Q96LT4 415 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 SYT4Q9H2B2 425 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 LRMDAQ9H2I8 198 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 MMADHCQ9H3L0 296 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-207ENST00000486572 C1orf198Q9H425 327 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 ZNF442Q9H7R0 627 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 YY1AP1Q9H869 796 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 CCNB1IP1Q9NPC3 277 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 VSX1Q9NZR4 365 aaPredicted RBP15.76■□□□□ 0.11
COL1A1-207ENST00000486572 CDH10Q9Y6N8 788 aa15.76■□□□□ 0.11
COL1A1-207ENST00000486572 ARID1AO14497 2285 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 GASTP01350 101 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 MMP7P09237 267 aaPredicted RBP15.75■□□□□ 0.11
COL1A1-207ENST00000486572 ZNF35P13682 527 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 CTLA4P16410 223 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 MSR1P21757 451 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 PLP2Q04941 152 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 SNTB2Q13425 540 aaKnown RBP15.75■□□□□ 0.11
COL1A1-207ENST00000486572 DAG1Q14118 895 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 ADIPOQQ15848 244 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 KRT80Q6KB66 452 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 VHLLQ6RSH7 139 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 PTCHD4Q6ZW05 846 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 OR52L1Q8NGH7 329 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 CACNG6Q9BXT2 260 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 EGLN3Q9H6Z9 239 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 SPEF1Q9Y4P9 236 aa15.75■□□□□ 0.11
COL1A1-207ENST00000486572 USF3Q68DE3 2245 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 IQCMA0A1B0GVH7 501 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 GNGT2O14610 69 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 SLC16A7O60669 478 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 FKBP6O75344 327 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 PTHP01270 115 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 CST2P09228 141 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 OR4A8P0C604 315 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 BMP4P12644 408 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 ZNF32P17041 273 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 NR4A1P22736 598 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 LAP3P28838 519 aa15.74■□□□□ 0.11
COL1A1-207ENST00000486572 NOS3P29474 1203 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms