RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ZNF99A8MXY4 864 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC1A7O00341 560 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CXCR6O00574 342 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GAPDHSO14556 408 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 YY2O15391 372 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TAPBPO15533 448 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 LRP3O75074 770 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CREG1O75629 220 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ADAP1O75689 374 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GATBO75879 557 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NFATC1O95644 943 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 LDOC1O95751 146 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CLIC3O95833 236 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ANGPTL1O95841 491 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 SERPINA1P01009 418 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GP1BAP07359 652 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 OR4Q2P0C623 313 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 PRSS56P0CW18 603 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 EFNA1P20827 205 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GCSHP23434 173 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CD82P27701 267 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ELK4P28324 431 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MPIP34949 423 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ID1P41134 155 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TNFRSF4P43489 277 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 AVPR1BP47901 424 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 SRP9P49458 86 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 COMPP49747 757 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CCL11P51671 97 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 PRKXP51817 358 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 DGKQP52824 942 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MLLT10P55197 1068 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MTCP1P56278 107 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MTPNP58546 118 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC35A2P78381 396 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MRPS34P82930 218 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TNFRSF9Q07011 255 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 AQP6Q13520 282 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 FHL3Q13643 280 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GANABQ14697 944 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ABRAXAS2Q15018 415 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NPTX1Q15818 432 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NEDD8Q15843 81 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CDKN3Q16667 212 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ODF4Q2M2E3 257 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 SLC36A2Q495M3 483 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GLYR1Q49A26 553 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GPRC6AQ5T6X5 926 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 FAM69BQ5VUD6 431 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 AGAP6Q5VW22 663 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TRIQKQ629K1 86 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 REEP3Q6NUK4 255 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 FAM71F2Q6NXP2 309 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ASCL4Q6XD76 172 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 DPY19L3Q6ZPD9 716 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 FAM92BQ6ZTR7 304 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ASB18Q6ZVZ8 466 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TIPARPQ7Z3E1 657 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 RBM23Q86U06 439 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 IFNEQ86WN2 208 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 LACC1Q8IV20 430 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CPNE9Q8IYJ1 553 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MTURNQ8N3F0 131 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 INO80EQ8NBZ0 244 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 OR10A7Q8NGE5 316 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CXorf40AQ8TE69 158 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 EEF1AKMT1Q8WVE0 214 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TMEM171Q8WVE6 324 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TRMT61AQ96FX7 289 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 PYURFQ96I23 114 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 RNF170Q96K19 258 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ZFP3Q96NJ6 502 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 TGM7Q96PF1 710 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ZNF300Q96RE9 604 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NODALQ96S42 347 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 RASL10BQ96S79 203 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NIPSNAP1Q9BPW8 284 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 KLHDC3Q9BQ90 382 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 AIF1LQ9BQI0 150 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NEURL2Q9BR09 285 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ZNF426Q9BUY5 554 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 FUNDC2Q9BWH2 189 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 POLDIP3Q9BY77 421 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 ACTRT3Q9BYD9 372 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 DPY30Q9C005 99 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 CCDC90BQ9GZT6 254 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 PCBD2Q9H0N5 130 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 PIGMQ9H3S5 423 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 EGLN3Q9H6Z9 239 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 LRTM1Q9HBL6 345 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MOV10Q9HCE1 1003 aaKnown RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 HMG20AQ9NP66 347 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 RAB18Q9NP72 206 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 IL1RAPQ9NPH3 570 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 KRCC1Q9NPI7 259 aaPredicted RBP3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 POLE4Q9NR33 117 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 GPR173Q9NS66 373 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 MARCH5Q9NX47 278 aa3.61□□□□□ -1.83
PRPF38B-205ENST00000485810 LHX3Q9UBR4 397 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms