RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 SLC22A24Q8N4F4 322 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 OR52E2Q8NGJ4 325 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 OR1J2Q8NGS2 313 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 OR4K13Q8NH42 304 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 NSMAFQ92636 917 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 HDAC2Q92769 488 aaKnown RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 OTULINQ96BN8 352 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 RASD2Q96D21 266 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 PKP2Q99959 881 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 NIPSNAP1Q9BPW8 284 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 CDADC1Q9BWV3 514 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 VCX3BQ9H321 246 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 RERGLQ9H628 205 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 EGLN3Q9H6Z9 239 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 DCLRE1BQ9H816 532 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 RNF121Q9H920 327 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 TMEM38BQ9NVV0 291 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 VSX1Q9NZR4 365 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 H2AFY2Q9P0M6 372 aaPredicted RBP7.25□□□□□ -1.25
SF3A1-208ENST00000485618 IL20RAQ9UHF4 553 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 OAZ3Q9UMX2 235 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 ADAM18Q9Y3Q7 739 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 FKBP7Q9Y680 259 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 CELSR1Q9NYQ6 3014 aa7.25□□□□□ -1.25
SF3A1-208ENST00000485618 IQCMA0A1B0GVH7 501 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SAC3D1A6NKF1 404 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SNTNA6NMZ2 147 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 PRR23D1E9PI22 279 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 BHLHE40O14503 412 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 RRP9O43818 475 aaKnown RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SOX14O95416 240 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 CRYAAP02489 173 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 PRR23D2P0DMB1 279 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 BMP4P12644 408 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 B4GALT1P15291 398 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 CBR1P16152 277 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 HIST1H1CP16403 213 aaKnown RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF26P17031 533 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 MSR1P21757 451 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 LAP3P28838 519 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 ALDH3A2P51648 485 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SLC25A1P53007 311 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 RUNX1T1Q06455 604 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 DAG1Q14118 895 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 TESK1Q15569 626 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 TSC22D1Q15714 1073 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SNAPC1Q16533 368 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 PGGHGQ32M88 737 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 HIKESHIQ53FT3 197 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SLC35F1Q5T1Q4 408 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 FAM27BQ5VT28 67 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 KDM4DQ6B0I6 523 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SLC25A47Q6Q0C1 308 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SPNS3Q6ZMD2 512 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 TMEM179BQ7Z7N9 219 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 TMEM200AQ86VY9 491 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 C1orf174Q8IYL3 243 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 PACRGLQ8N7B6 248 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 PROKR2Q8NFJ6 384 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 OR10H5Q8NGA6 315 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 IPCEF1Q8WWN9 437 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 RDH12Q96NR8 316 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SYT4Q9H2B2 425 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 CLEC4MQ9H2X3 399 aaPredicted RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 NELFAQ9H3P2 528 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SRA1Q9HD15 236 aaKnown RBP7.24□□□□□ -1.25
SF3A1-208ENST00000485618 CMC2Q9NRP2 79 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 KCNG2Q9UJ96 466 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 MOKQ9UQ07 419 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 POLR1DQ9Y2S0 133 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 TIMM10BQ9Y5J6 103 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 SLC25A15Q9Y619 301 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 APCP25054 2843 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 ABCA4P78363 2273 aa7.24□□□□□ -1.25
SF3A1-208ENST00000485618 DCHS2Q6V1P9 2916 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 A0A1W2PPL8 197 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 H3BNX3 289 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 M0R1B8 84 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CTAG2O75638 210 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 SLC2A10O95528 541 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 HRGP04196 525 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CST2P09228 141 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 ANPEPP15144 967 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 EDNRAP25101 427 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 FMO3P31513 532 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CDKN2AP42771 156 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 DAPP51397 102 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 ZNF83P51522 516 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CDC42P60953 191 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 LSM6P62312 80 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RAB1AP62820 205 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 CDK5Q00535 292 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 HSF2Q03933 536 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 SCRN3Q0VDG4 424 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 NPRL3Q12980 569 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 SNTB1Q13884 538 aaKnown RBP7.23□□□□□ -1.25
SF3A1-208ENST00000485618 RCN1Q15293 331 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 TRIP10Q15642 601 aa7.23□□□□□ -1.25
SF3A1-208ENST00000485618 MESTQ5EB52 335 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms