RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 RBP7Q96R05 134 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 AMELYQ99218 206 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 SLC7A10Q9NS82 523 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ERVK13-1Q9NX77 482 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 ZNF835Q9Y2P0 537 aa12.84□□□□□ -0.35
LRIF1-202ENST00000485275 MBD3L4A6NDZ8 208 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MBD3L3A6NE82 208 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MBD3L5A6NJ08 208 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 CD8B2A6NJW9 211 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 TTLL8A6PVC2 850 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MAGEB4O15481 346 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 AKAP8O43823 692 aaKnown RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 SLC43A1O75387 559 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MRPL33O75394 65 aaKnown RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 KHDRBS3O75525 346 aaKnown RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 SEC14L2O76054 403 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 ABOP16442 354 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 ATP6V1E1P36543 226 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 CENPAP49450 140 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 GP2P55259 537 aaKnown RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 GLO1Q04760 184 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 GFRALQ6UXV0 394 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 SLC35F2Q8IXU6 374 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MBD3L2Q8NHZ7 208 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 WNT2BQ93097 391 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 MUL1Q969V5 352 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 NABP1Q96AH0 204 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 GMPPAQ96IJ6 420 aaPredicted RBP12.83□□□□□ -0.36
LRIF1-202ENST00000485275 ULBP2Q9BZM5 246 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 SLCO5A1Q9H2Y9 848 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 C12orf49Q9H741 205 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 PRSS50Q9UI38 385 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 KCNG2Q9UJ96 466 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 TINAGQ9UJW2 476 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 SNX5Q9Y5X3 404 aa12.83□□□□□ -0.36
LRIF1-202ENST00000485275 A0A1W2PPL8 197 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 SLC19A2O60779 497 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 WDR1O75083 606 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 HLA-DQA2P01906 255 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 HSF2Q03933 536 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 POU4F2Q12837 409 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 RNLSQ5VYX0 342 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 DNM1P34Q6PK57 102 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 FOXL2NBQ6ZUU3 175 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 DPY19L4Q7Z388 723 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 SATL1Q86VE3 508 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 CDC20BQ86Y33 519 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 DOLPP1Q86YN1 238 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 GLB1L2Q8IW92 636 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 ACBD7Q8N6N7 88 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 NANOGP1Q8N7R0 232 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 OR6N2Q8NGY6 317 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 C11orf40Q8WZ69 217 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 INTS12Q96CB8 462 aaKnown RBP12.82□□□□□ -0.36
LRIF1-202ENST00000485275 INTS14Q96SY0 518 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 ISG20L2Q9H9L3 353 aaKnown RBP12.82□□□□□ -0.36
LRIF1-202ENST00000485275 EMC7Q9NPA0 242 aa12.82□□□□□ -0.36
LRIF1-202ENST00000485275 DHHO43323 396 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 LALBAP00709 142 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 LAP3P28838 519 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 KIR2DL2P43627 348 aaPredicted RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 SIRPAP78324 504 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 UBE2UQ5VVX9 321 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 NCCRP1Q6ZVX7 275 aaPredicted RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 SLC16A9Q7RTY1 509 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 GP6Q9HCN6 339 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 INTS1Q8N201 2190 aaKnown RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 NCOA6Q14686 2063 aaPredicted RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 EPG5Q9HCE0 2579 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 IRGMA1A4Y4 181 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 FIGNL2A6NMB9 653 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 TNFSF13O75888 250 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 SFTPCP11686 197 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 EDN3P14138 238 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 GABRA1P14867 456 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 JUNBP17275 347 aaPredicted RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 NR1H2P55055 460 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 ADAM8P78325 824 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 NFATC3Q12968 1075 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 RAB39AQ14964 217 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 PCK2Q16822 640 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 FAM214BQ7L5A3 538 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 LINC00346Q8IVM7 164 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 SVOPQ8N4V2 548 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 FNDC8Q8TC99 324 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 APH1AQ96BI3 265 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 ALG8Q9BVK2 526 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 GPR35Q9HC97 309 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 POLE4Q9NR33 117 aa12.81□□□□□ -0.36
LRIF1-202ENST00000485275 EXOSC1Q9Y3B2 195 aaKnown RBP12.81□□□□□ -0.36
LRIF1-202ENST00000485275 TMEM129A0AVI4 362 aa12.8□□□□□ -0.36
LRIF1-202ENST00000485275 DPPA5A6NC42 116 aa12.8□□□□□ -0.36
LRIF1-202ENST00000485275 PSMD9O00233 223 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms