RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 SIAEQ9HAT2 523 aa11.79□□□□□ -0.52
SOX2-OT-209ENST00000485035 IL20Q9NYY1 176 aa11.79□□□□□ -0.52
SOX2-OT-209ENST00000485035 VSX1Q9NZR4 365 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-209ENST00000485035 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-209ENST00000485035 POU2F3Q9UKI9 436 aa11.79□□□□□ -0.52
SOX2-OT-209ENST00000485035 OTOGQ6ZRI0 2925 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 IGHV2OR16-5A0A0B4J2B6 119 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 BHLHE40O14503 412 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 ENTPD5O75356 428 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 CIB2O75838 187 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 SOX14O95416 240 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 RAB36O95755 333 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 SCG5P05408 212 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 HIST1H1CP16403 213 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 DBPQ10586 325 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 SGCAQ16586 387 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 RPL13AP3Q6NVV1 102 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 SLC16A14Q7RTX9 510 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 ZNF584Q8IVC4 421 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 DEPDC4Q8N2C3 294 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 PIGTQ969N2 578 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 DUS3LQ96G46 650 aaKnown RBP11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 FOXC2Q99958 501 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 CXXC4Q9H2H0 198 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 NTN4Q9HB63 628 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 PDP1Q9P0J1 537 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 DNAJB9Q9UBS3 223 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 LAMP3Q9UQV4 416 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 ATP23Q9Y6H3 246 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 PRR14LQ5THK1 2151 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 RAI1Q7Z5J4 1906 aaPredicted RBP11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 AKAP9Q99996 3911 aa11.78□□□□□ -0.52
SOX2-OT-209ENST00000485035 A0A1W2PPL8 197 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 DCTN6O00399 190 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC16A7O60669 478 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 E2F6O75461 281 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 CD8AP01732 235 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 CRYAAP02489 173 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 MMP7P09237 267 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 NPR2P20594 1047 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 GSTM3P21266 225 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 LAP3P28838 519 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 HGFACQ04756 655 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 ENDOGQ14249 297 aaKnown RBP11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 RAB39AQ14964 217 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC36A2Q495M3 483 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 SLC35F1Q5T1Q4 408 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 FAM27BQ5VT28 67 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 LEG1Q6P5S2 330 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 CD300LDQ6UXZ3 194 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR52L1Q8NGH7 329 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR4K13Q8NH42 304 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 FBXO17Q96EF6 278 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 TSSK2Q96PF2 358 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 NMNAT3Q96T66 252 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 DHRS9Q9BPW9 319 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 KCNS3Q9BQ31 491 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 NUAK2Q9H093 628 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 POLE4Q9NR33 117 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 TBC1D23Q9NUY8 699 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 ARMC1Q9NVT9 282 aa11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
SOX2-OT-209ENST00000485035 IDH3BO43837 385 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 MGRN1O60291 552 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 DEAF1O75398 565 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 SERPINA5P05154 406 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 PRKACGP22612 351 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 NOS3P29474 1203 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 ATP6AP1Q15904 470 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 OTPQ5XKR4 325 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 TMEM53Q6P2H8 277 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 SHQ1Q6PI26 577 aaKnown RBP11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 DPPA2Q7Z7J5 298 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 DTX2Q86UW9 622 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 JAZF1Q86VZ6 243 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 SDR9C7Q8NEX9 313 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR4Q3Q8NH05 313 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 TMEM171Q8WVE6 324 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 TRAF4Q9BUZ4 470 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF416Q9BWM5 594 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 TSSK6Q9BXA6 273 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 RERGLQ9H628 205 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 RNF121Q9H920 327 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 REV1Q9UBZ9 1251 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 COA3Q9Y2R0 106 aaPredicted RBP11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 AP4S1Q9Y587 144 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 NAV2Q8IVL1 2488 aa11.76□□□□□ -0.53
SOX2-OT-209ENST00000485035 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 OR6C68A6NDL8 312 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 OVOL3O00110 214 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 SMPD2O60906 423 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 KHDRBS3O75525 346 aaKnown RBP11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 GPANK1O95872 356 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 CST2P09228 141 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF35P13682 527 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 ZNF32P17041 273 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 MSR1P21757 451 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 TTKP33981 857 aa11.75□□□□□ -0.53
SOX2-OT-209ENST00000485035 FABP6P51161 128 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms