RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 OSGIN1Q9UJX0 560 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 MOKQ9UQ07 419 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 RNF6Q9Y252 685 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 ERGIC3Q9Y282 383 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 SIGLEC7Q9Y286 467 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 EXOSC1Q9Y3B2 195 aaKnown RBP3.84□□□□□ -1.79
SPTA1-206ENST00000484520 TMED7Q9Y3B3 224 aa3.84□□□□□ -1.79
SPTA1-206ENST00000484520 MDC1Q14676 2089 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SETXQ7Z333 2677 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 IGKV1D-42A0A075B6H8 117 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TRAV17A0A0B4J275 112 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TMEM129A0AVI4 362 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 OR5H15A6NDH6 313 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CD8B2A6NJW9 211 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HSPB2A8KAH6 182 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 H7C1Q1 480 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 KPNA4O00629 521 aaPredicted RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 BHLHE40O14503 412 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CDC42EP2O14613 210 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PHYHO14832 338 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 MYL12BO14950 172 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RRP8O43159 456 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TPD52L2O43399 206 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TLX3O43711 291 aaPredicted RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TLX2O43763 284 aaPredicted RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PTP4A3O75365 173 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SOX14O95416 240 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PMS2P2O95744 297 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RAB36O95755 333 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CLIC3O95833 236 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CH25HO95992 272 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RENP00797 406 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 THY1P04216 161 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CDK1P06493 297 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SMIM18P0DKX4 95 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 DBTP11182 482 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ATP6V1B1P15313 513 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CD53P19397 219 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 MST1P26927 711 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ACVR2AP27037 513 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 DPP4P27487 766 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CRABP1P29762 137 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 UQCRC1P31930 480 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ATP6V1E1P36543 226 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PTGDSP41222 190 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SLC15A1P46059 708 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 MTNR1AP48039 350 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CDH11P55287 796 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 NANOS2P60321 138 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RPS18P62269 152 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ACTA2P62736 377 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ACTG2P63267 376 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ARG2P78540 354 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 EFNB1P98172 346 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HSF2Q03933 536 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CDC20Q12834 499 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ZP4Q12836 540 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 FOXF1Q12946 379 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PMS2P3Q13401 168 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 GGTLC2Q14390 218 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PON3Q15166 354 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SF3B4Q15427 424 aaKnown RBP eCLIP3.83□□□□□ -1.87e-11■■■□□ 14.9
SPTA1-206ENST00000484520 OR1C1Q15619 314 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HSPB2Q16082 182 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 BCL2A1Q16548 175 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ZNF239Q16600 458 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HYAL4Q2M3T9 481 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 CTU2Q2VPK5 515 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 NDUFAF6Q330K2 333 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SYT14P1Q58G82 188 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 ALG10Q5BKT4 473 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RAET1LQ5VY80 246 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SFRP4Q6FHJ7 346 aaPredicted RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PAQR6Q6TCH4 344 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TMPRSS11AQ6ZMR5 421 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 WDR88Q6ZMY6 472 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 H1FNTQ75WM6 255 aaPredicted RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SLC46A3Q7Z3Q1 461 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PXKQ7Z7A4 578 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HMGN2P46Q86SG4 172 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SLC22A16Q86VW1 577 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 SPARTQ8N0X7 666 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 BEST3Q8N1M1 668 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TCEANCQ8N8B7 351 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 GATSQ8NAP1 163 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 BPIFB6Q8NFQ5 453 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 OR9Q1Q8NGQ5 310 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 OR13C2Q8NGS9 318 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 OR2T4Q8NH00 348 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PFN4Q8NHR9 129 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RAB2BQ8WUD1 216 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 THRSPQ92748 146 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 RORBQ92753 470 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 HAS2Q92819 552 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 PNPLA2Q96AD5 504 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 MIB2Q96AX9 1013 aa3.83□□□□□ -1.8
SPTA1-206ENST00000484520 DGCR14Q96DF8 476 aaKnown RBP3.83□□□□□ -1.8
SPTA1-206ENST00000484520 TMEM80Q96HE8 168 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms