RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 GGTLC2Q14390 218 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TRAM1Q15629 374 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 SGCBQ16585 318 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 GXYLT1Q4G148 440 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 KRTCAP3Q53RY4 240 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF362Q5T0B9 420 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 TMEM81Q6P7N7 255 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 C16orf87Q6PH81 154 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 RPTNQ6XPR3 784 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ADGRG3Q86Y34 549 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 SCAIQ8N9R8 606 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 FAM83FQ8NEG4 500 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 OR6K6Q8NGW6 343 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 OR2T4Q8NH00 348 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 MOSPD2Q8NHP6 518 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 RNF138Q8WVD3 245 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 SPRYD4Q8WW59 207 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 RASD2Q96D21 266 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 NMNAT3Q96T66 252 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 CENPOQ9BU64 300 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ANGPTL4Q9BY76 406 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 POTEKPQ9BYX7 375 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 KCNN2Q9H2S1 579 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 PALMDQ9NP74 551 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 INIPQ9NRY2 104 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 BABAM2Q9NXR7 383 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 CRNNQ9UBG3 495 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 VDAC3Q9Y277 283 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ADAM18Q9Y3Q7 739 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 ABCA12Q86UK0 2595 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 DOCK7Q96N67 2140 aa6.19□□□□□ -1.42
BRCA1-216ENST00000484087 HRNRQ86YZ3 2850 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-216ENST00000484087 PNMA8CA0A1B0GUJ8 204 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ZC3H12DA2A288 527 aaKnown RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CCDC182A6NF36 153 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 A6NIZ1 184 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 C11orf98E9PRG8 122 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ZNF670-ZNF695F2Z2N8 137 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 H0YC42 278 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ARHGEF9O43307 516 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 NPIPB7O75200 414 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 GPX5O75715 221 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 F13BP05160 661 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 GYPBP06028 91 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CLUP10909 449 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SPI1P17947 270 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CD53P19397 219 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CELP19835 753 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 GALP22466 123 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ADH6P28332 368 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 GRPRP30550 384 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 IDUAP35475 653 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 DIO1P49895 249 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ENTPD1P49961 510 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 RORCP51449 518 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 BLVRAP53004 296 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CASP6P55212 293 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 PER3P56645 1201 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 RAP1BP61224 184 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 RAP1AP62834 184 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SRYQ05066 204 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 PMPCAQ10713 525 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 FOXF1Q12946 379 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SLC10A1Q14973 349 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 HYAL4Q2M3T9 481 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SLC25A53Q5H9E4 307 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 C3orf33Q6P1S2 294 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 B3GLCTQ6Y288 498 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SEM1Q6ZVN7 128 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 PLCZ1Q86YW0 608 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 KLBQ86Z14 1044 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 LIX1LQ8IVB5 337 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SLC35F2Q8IXU6 374 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 LRRC75AQ8NAA5 344 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 NAXEQ8NCW5 288 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 NPEPL1Q8NDH3 523 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ATP6V1C2Q8NEY4 427 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 OR6Q1Q8NGQ2 317 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 OR1J4Q8NGS1 313 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 MFSD8Q8NHS3 518 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 HAVCR2Q8TDQ0 301 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SLC25A43Q8WUT9 341 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 SNX33Q8WV41 574 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 KISS1RQ969F8 398 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ZBTB8AQ96BR9 441 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ZMYND19Q96E35 227 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 CEP19Q96LK0 163 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 Q96M85 177 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 KCTD7Q96MP8 289 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 MNTQ99583 582 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 TBX5Q99593 518 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ALG12Q9BV10 488 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 HCAR1Q9BXC0 346 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 C6orf62Q9GZU0 229 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ADGRL4Q9HBW9 690 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 ASB6Q9NWX5 421 aa6.18□□□□□ -1.42
BRCA1-216ENST00000484087 MRPL39Q9NYK5 338 aaKnown RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 FOXD3Q9UJU5 478 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-216ENST00000484087 PEX16Q9Y5Y5 336 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms