RNA–Protein interactions for RNA: ENST00000482904.1

RHBDF1-208, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-208ENST00000482904 ARL8BQ9NVJ2 186 aa20.28■□□□□ 0.84
RHBDF1-208ENST00000482904 NDUFAF4Q9P032 175 aa20.28■□□□□ 0.84
RHBDF1-208ENST00000482904 UGT2A1Q9Y4X1 527 aa20.28■□□□□ 0.84
RHBDF1-208ENST00000482904 A0A1W2PPL8 197 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 A0A1W2PPW3 197 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 A0A1W2PRQ8 180 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 SLC22A23A1A5C7 686 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 CDC42EP2O14613 210 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 TLX2O43763 284 aaPredicted RBP20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 MGRN1O60291 552 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 FAM157BP0CG42 384 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 CCL2P13500 99 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 HSD17B1P14061 328 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 ITGA2P17301 1181 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 APLNRP35414 380 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 GUCA1AP43080 201 aaPredicted RBP20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 ERVK-25P63136 954 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 DGCR6Q14129 220 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 TMEM249Q2WGJ8 235 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 ZBED5Q49AG3 693 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 THEM4Q5T1C6 240 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 PODNL1Q6PEZ8 512 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 TMPRSS11FQ6ZWK6 438 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 TSEN54Q7Z6J9 526 aaKnown RBP20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 OR1J2Q8NGS2 313 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 ZNF519Q8TB69 540 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 NEU4Q8WWR8 484 aaPredicted RBP20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 LRMDAQ9H2I8 198 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 OR51B6Q9H340 312 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 TPK1Q9H3S4 243 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 GORASP2Q9H8Y8 452 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 GRHPRQ9UBQ7 328 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 FZR1Q9UM11 496 aa20.27■□□□□ 0.84
RHBDF1-208ENST00000482904 NIPBLQ6KC79 2804 aaeCLIP20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 IGKV1D-43A0A0B4J1Z2 117 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 LOC390937A0A1W2PQ73 354 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 TMEM129A0AVI4 362 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 H7C1C5 153 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 XKRYO14609 159 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 SYNGR3O43761 229 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 DIRAS1O95057 198 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 USF1P22415 310 aaPredicted RBP20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 LCN6P62502 163 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 VLDLRP98155 873 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 FXNQ16595 210 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 ZCCHC24Q8N2G6 241 aaKnown RBP20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 NABP1Q96AH0 204 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 MCUR1Q96AQ8 359 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 NSMCE2Q96MF7 247 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 ZNF570Q96NI8 536 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 CDRT15Q96T59 188 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 DUSP13Q9UII6 198 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 CR1P17927 2039 aa20.26■□□□□ 0.83
RHBDF1-208ENST00000482904 ARPC2O15144 300 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 DAOP14920 347 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 EVX1P49640 407 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 FHL1Q13642 323 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 MSMPQ1L6U9 139 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 PABPC1L2AQ5JQF8 200 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 RGS7BPQ6MZT1 257 aaPredicted RBP20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 SLC25A47Q6Q0C1 308 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 DEFB107AQ8IZN7 70 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 PAQR4Q8N4S7 273 aaPredicted RBP20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 ARIH2OSQ8N7S6 290 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 ICA1LQ8NDH6 482 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 OR52J3Q8NH60 311 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 PYURFQ96I23 114 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 C7orf34Q96L11 122 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 AURKCQ9UQB9 309 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 ADAM18Q9Y3Q7 739 aa20.25■□□□□ 0.83
RHBDF1-208ENST00000482904 ZANQ9Y493 2812 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 ARFGEF3Q5TH69 2177 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 TRBV4-1A0A0J9YWV2 114 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 SNAP29O95721 258 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 LCKP06239 509 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 CD14P08571 375 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 MMP7P09237 267 aaPredicted RBP20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 ZNF32P17041 273 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 CCNOP22674 350 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 APEX1P27695 318 aaKnown RBP20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 MSX2P35548 267 aaPredicted RBP20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 ALDH3B1P43353 468 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 NR4A2P43354 598 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 SPIBQ01892 262 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 IQCCQ4KMZ1 466 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 RSRC1Q96IZ7 334 aaKnown RBP20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 REV1Q9UBZ9 1251 aa20.24■□□□□ 0.83
RHBDF1-208ENST00000482904 NDUFB2O95178 105 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 LAP3P28838 519 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 MNAT1P51948 309 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 SMIM11AP58511 58 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 SELENOVP59797 346 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 MAD2L1BPQ15013 274 aaPredicted RBP20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 C6orf52Q5T4I8 152 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 LRP11Q86VZ4 500 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 ZNF540Q8NDQ6 660 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 FOXN4Q96NZ1 517 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 BPESC1Q9GZL8 116 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 MS4A5Q9H3V2 200 aa20.23■□□□□ 0.83
RHBDF1-208ENST00000482904 TEX13CA0A0J9YWL9 993 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms