RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 PAQR5Q9NXK6 330 aaPredicted RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 CDV3Q9UKY7 258 aaKnown RBP9.82□□□□□ -0.84
VTI1A-204ENST00000480057 RCE1Q9Y256 329 aa9.82□□□□□ -0.84
VTI1A-204ENST00000480057 TRAV1-2A0A0B4J238 106 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ANKRD61A6NGH8 418 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 CD8B2A6NJW9 211 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 PRR32B1ATL7 298 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 NPIPA2E9PIF3 369 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 NPIPA3F8WFD2 350 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 TNFSF11O14788 317 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 CASKO14936 926 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ARL6IP5O75915 188 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 OPN1LWP04000 364 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 SPARCP09486 303 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 CD8BP10966 210 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 SDHBP21912 280 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 MYL9P24844 172 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 LAP3P28838 519 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 DCTDP32321 178 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 SDC2P34741 201 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 RASGEF1BQ0VAM2 473 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 CDC20Q12834 499 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 CLN3Q13286 438 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ALKBH1Q13686 389 aaKnown RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ETFDHQ16134 617 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ACSM3Q53FZ2 586 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 WIPI1Q5MNZ9 446 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 C10orf128Q5T292 105 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 LIPNQ5VXI9 398 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ABLIM2Q6H8Q1 611 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 FOXL2NBQ6ZUU3 175 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 RHOUQ7L0Q8 258 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 GPAT4Q86UL3 456 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 VASH2Q86V25 355 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 YIPF7Q8N8F6 280 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 SYT14Q8NB59 555 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 OR9K2Q8NGE7 335 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 OR52N5Q8NH56 324 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 RNF128Q8TEB7 428 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 THEM6Q8WUY1 208 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ACOT12Q8WYK0 555 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 RNF166Q96A37 237 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 KCTD12Q96CX2 325 aaKnown RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 MROQ9BYG7 248 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 TTTY12Q9BZ98 90 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 BARHL1Q9BZE3 327 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 C6orf62Q9GZU0 229 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF552Q9H707 407 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 SMURF1Q9HCE7 757 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 PLA2G3Q9NZ20 509 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 IKZF2Q9UKS7 526 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF281Q9Y2X9 895 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 GRIP1Q9Y3R0 1128 aa9.81□□□□□ -0.84
VTI1A-204ENST00000480057 EP300Q09472 2414 aaPredicted RBP9.81□□□□□ -0.84
VTI1A-204ENST00000480057 MYO15AQ9UKN7 3530 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM212A6NML5 194 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ZNF879B4DU55 563 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ACOT7O00154 380 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 EIF1AYO14602 144 aaKnown RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 SMAD9O15198 467 aaKnown RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 NKX2-8O15522 239 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 LRRTM2O43300 516 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 RAMP1O60894 148 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 CEACAM4O75871 244 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ACTL6AO96019 429 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 UCHL1P09936 223 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 OR8G3PP0DMU2 310 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 BMP4P12644 408 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 MAPK3P27361 379 aaPredicted RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 CSNK1A1P48729 337 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 MEOX1P50221 254 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 RIDAP52758 137 aaKnown RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 PPP5CP53041 499 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 CLDN17P56750 224 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ARG2P78540 354 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 PLGLB1Q02325 96 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 FMODQ06828 376 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 EIF2B1Q14232 305 aaKnown RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 INAQ16352 499 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 MEP1BQ16820 701 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ZMAT1Q5H9K5 638 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ATP1A1-AS1Q5TC04 95 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 RPTNQ6XPR3 784 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 GALNTL5Q7Z4T8 443 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 CEACAM19Q7Z692 300 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 KRT77Q7Z794 578 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 CCDC190Q86UF4 302 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 SLC22A16Q86VW1 577 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM123Q8N131 208 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 FAM109AQ8N4B1 249 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 MEIOBQ8N635 442 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 TMEM251Q8N6I4 163 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 OR10H5Q8NGA6 315 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 OR10D3Q8NH80 312 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 NSMAFQ92636 917 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 MCHR2Q969V1 340 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 RELTQ969Z4 430 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 OR2M2Q96R28 347 aa9.8□□□□□ -0.84
VTI1A-204ENST00000480057 DCLRE1CQ96SD1 692 aaKnown RBP9.8□□□□□ -0.84
VTI1A-204ENST00000480057 ABHD6Q9BV23 337 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms