RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 MFSD13AQ14CX5 517 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TRAM2Q15035 370 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 STK11Q15831 433 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM176BQ3YBM2 270 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 GXYLT1Q4G148 440 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 SYT14P1Q58G82 188 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZMAT1Q5H9K5 638 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 C1orf185Q5T7R7 199 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 HBMQ6B0K9 141 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 KCTD8Q6ZWB6 473 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 VTCN1Q7Z7D3 282 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZDHHC21Q8IVQ6 265 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 MCEMP1Q8IX19 187 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CDK20Q8IZL9 346 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 OR5T2Q8NGG2 359 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 OR10Q1Q8NGQ4 319 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 POC1BQ8TC44 478 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 FANK1Q8TC84 345 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 LRRC20Q8TCA0 184 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZPLD1Q8TCW7 415 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 HDAC2Q92769 488 aaKnown RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 SLC38A4Q969I6 547 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF566Q969W8 418 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 CPNE4Q96A23 557 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 WDYHV1Q96HA8 205 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TRIB1Q96RU8 372 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 SEPHS2Q99611 448 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 PKP2Q99959 881 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 GAL3ST1Q99999 423 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM246Q9BRR3 403 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 NAA11Q9BSU3 229 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 POTEKPQ9BYX7 375 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 AMBRA1Q9C0C7 1298 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ANKRD19PQ9H560 264 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM185BQ9H7F4 350 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RPRD1BQ9NQG5 326 aaKnown RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZC4H2Q9NQZ6 224 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 SH3BGRL2Q9UJC5 107 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF229Q9UJW7 825 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RALYQ9UKM9 306 aaKnown RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 SLC7A7Q9UM01 511 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 AURKCQ9UQB9 309 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 OSGIN2Q9Y236 505 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TRAPPC4Q9Y296 219 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM5Q9Y2B1 443 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ZNF835Q9Y2P0 537 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 RBMX2Q9Y388 322 aaKnown RBP5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ENPP4Q9Y6X5 453 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ATMQ13315 3056 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 EPG5Q9HCE0 2579 aa5.52□□□□□ -1.53
SF3B1-209ENST00000479532 ITPR1Q14643 2758 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PIEZO2Q9H5I5 2752 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 BSNQ9UPA5 3926 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SHANK1Q9Y566 2161 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TRAV36DV7A0A075B6V5 113 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 A0A087WUJ7 227 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 DHRS12A0PJE2 317 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 TMEM72A0PK05 275 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PRSS44E7EML9 344 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 E9PLN8 166 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 LOC110117498-PIK3R3F6TDL0 507 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 H3BUI4 141 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 J3QKU1 62 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SULT2B1O00204 365 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CCL21O00585 134 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GNGT2O14610 69 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 DNPH1O43598 174 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 EIF1BO60739 113 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PTP4A3O75365 173 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GADD45GO95257 159 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PMS2P2O95744 297 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 HPRP00739 348 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 PLGP00747 810 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GASTP01350 101 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 HIST1H2ABP04908 130 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 H1F0P07305 194 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 STSP08842 583 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 VSIG10L2P0DP72 767 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 IL7P13232 177 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GYPEP15421 78 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 RAB3AP20336 220 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 HTR2AP28223 471 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 IFNGR2P38484 337 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 STARP49675 285 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SMSP52788 366 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CDH12P55289 794 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CLDN15P56746 228 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CLDN18P56856 261 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 CLDN20P56880 219 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 RAB25P57735 213 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 OR2B6P58173 313 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 RAC3P60763 192 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SLC35A1P78382 337 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MS4A2Q01362 244 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 SPIBQ01892 262 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 MRPL49Q13405 166 aaKnown RBP5.51□□□□□ -1.53
SF3B1-209ENST00000479532 GK3PQ14409 553 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 IGFBP7Q16270 282 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 C3AR1Q16581 482 aa5.51□□□□□ -1.53
SF3B1-209ENST00000479532 EIF2S3LQ2VIR3 472 aaKnown RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms