RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 HCN1O60741 890 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 TM7SF2O76062 418 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 NDUFA7O95182 113 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 LY6G6CO95867 125 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 OPN1MWP04001 364 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 KRTAP1-4P0C5Y4 121 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 DNAH10OSP0CZ25 163 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 OPN1MW2P0DN77 364 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 OPN1MW3P0DN78 364 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ETS1P14921 441 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 SDC1P18827 310 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 PTPN6P29350 595 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 RFC3P40938 356 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ACTR1BP42025 376 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 GNPDA1P46926 289 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ACTR1AP61163 376 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 GNG11P61952 73 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CKAP4Q07065 602 aaKnown RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 PUDPQ08623 228 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 IL18R1Q13478 541 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ASAH1Q13510 395 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 PAN3Q58A45 887 aaKnown RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 IRGCQ6NXR0 463 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF562Q6V9R5 426 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 NET1Q7Z628 596 aaPredicted RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC50Q8IVM0 306 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC36Q8IYA8 594 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ELMOD2Q8IZ81 293 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 MCOLN2Q8IZK6 566 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 TMEM86AQ8N2M4 240 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 RPP25LQ8N5L8 163 aaKnown RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 RNF148Q8N7C7 305 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 OR56B1Q8NGI3 324 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 PSMF1Q92530 271 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 FCGR1BQ92637 280 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 TADA1Q96BN2 335 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CRACR2AQ9BSW2 395 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 NMNAT2Q9BZQ4 307 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 IKZF5Q9H5V7 419 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 ZNF160Q9HCG1 818 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 EXOSC3Q9NQT5 275 aaKnown RBP3.61□□□□□ -1.83
CCDC171-207ENST00000478913 GPATCH2LQ9NWQ4 482 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 IL37Q9NZH6 218 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 WIF1Q9Y5W5 379 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 MYCBP2O75592 4640 aa3.61□□□□□ -1.83
CCDC171-207ENST00000478913 CTAGE15A4D2H0 777 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 FBLL1A6NHQ2 334 aaKnown RBP3.6□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC169A6NNP5 214 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 LGALS8O00214 317 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 IMPA2O14732 288 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 TNFSF11O14788 317 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 CPLX1O14810 134 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 SOD3P08294 240 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 IGFBP1P08833 259 aaPredicted RBP3.6□□□□□ -1.83
CCDC171-207ENST00000478913 IL2RGP31785 369 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 MNAT1P51948 309 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 MYL5Q02045 173 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 SNRNP35Q16560 246 aaKnown RBP3.6□□□□□ -1.83
CCDC171-207ENST00000478913 WHAMMP3Q1A5X7 153 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 TFDP3Q5H9I0 405 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 SLC22A10Q63ZE4 541 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 HACD2Q6Y1H2 254 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 ABHD13Q7L211 337 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 CTAGE6Q86UF2 777 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC12Q8WUD4 166 aaPredicted RBP3.6□□□□□ -1.83
CCDC171-207ENST00000478913 TAF4BQ92750 862 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 NCLNQ969V3 563 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 IFT74Q96LB3 600 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 KLHL28Q9NXS3 571 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 VNN3Q9NY84 501 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 IFNKQ9P0W0 207 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 EXOSC1Q9Y3B2 195 aaKnown RBP3.6□□□□□ -1.83
CCDC171-207ENST00000478913 KIF25-AS1Q9Y6Z4 181 aa3.6□□□□□ -1.83
CCDC171-207ENST00000478913 FAM92AA1XBS5 289 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 E9PMD0 336 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 H0YL77 283 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 H3BTX0 84 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SGK494L7N484 410 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 CLDN3O15551 220 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 STX10O60499 249 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SEC22BO75396 215 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SLITRK3O94933 977 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 YEATS4O95619 227 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 CCDC172P0C7W6 258 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 TSPAN8P19075 237 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 HTR5AP47898 357 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 VSX2P58304 361 aaPredicted RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 RPS24P62847 133 aaKnown RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 ZNHIT3Q15649 155 aaPredicted RBP3.59□□□□□ -1.83
CCDC171-207ENST00000478913 LDLRAP1Q5SW96 308 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 RIPPLY2Q5TAB7 128 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SLX4IPQ5VYV7 408 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 UNC5DQ6UXZ4 953 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 NECAB1Q8N987 351 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 OR2A12Q8NGT7 310 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 CXorf40AQ8TE69 158 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 TMIGD2Q96BF3 282 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SLC25A36Q96CQ1 311 aa3.59□□□□□ -1.83
CCDC171-207ENST00000478913 SAMD8Q96LT4 415 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms