RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ANKRD65E5RJM6 399 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 FARS2O95363 451 aaKnown RBP23.35■■□□□ 1.33
CCM2-211ENST00000478582 CBR1P16152 277 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 CTLA4P16410 223 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 DNASE1P24855 282 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 PTAFRP25105 342 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 SLC35F1Q5T1Q4 408 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 KDM4DQ6B0I6 523 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 LEG1Q6P5S2 330 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 DPPA2Q7Z7J5 298 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 NANOS1Q8WY41 292 aaKnown RBP23.35■■□□□ 1.33
CCM2-211ENST00000478582 NABP1Q96AH0 204 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 NMNAT3Q96T66 252 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 DDOQ99489 341 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 PLEKHA6Q9Y2H5 1048 aa23.35■■□□□ 1.33
CCM2-211ENST00000478582 HRNRQ86YZ3 2850 aaPredicted RBP23.35■■□□□ 1.33
CCM2-211ENST00000478582 A0A1W2PPR1 153 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 ZNF503-AS2A6NEH8 195 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 RENP00797 406 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 IGKV3-15P01624 115 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 GRK5P34947 590 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 GIPRP48546 466 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 ZNF83P51522 516 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 TUBA1BP68363 451 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 TUBA4AP68366 448 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 KHDRBS1Q07666 443 aaKnown RBP eCLIP23.34■■□□□ 1.33
CCM2-211ENST00000478582 TMEM108Q6UXF1 575 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 PAMR1Q6UXH9 720 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 TUBA1AQ71U36 451 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 NPEPL1Q8NDH3 523 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 ICA1LQ8NDH6 482 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 OR52E2Q8NGJ4 325 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 STMN2Q93045 179 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 HS3ST6Q96QI5 342 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 FOXC2Q99958 501 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 C1QTNF6Q9BXI9 259 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 NUAK2Q9H093 628 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 KLHL21Q9UJP4 597 aa23.34■■□□□ 1.33
CCM2-211ENST00000478582 ERICH4A6NGS2 130 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 SLC16A7O60669 478 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 KHDRBS3O75525 346 aaKnown RBP23.33■■□□□ 1.33
CCM2-211ENST00000478582 UBL3O95164 117 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 IGLV1-44P01699 117 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 HLA-HP01893 362 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 CRABP1P29762 137 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 CDAP32320 146 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 ARR3P36575 388 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 CDK5Q00535 292 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 BSPH1Q075Z2 132 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 ETFDHQ16134 617 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 PGGHGQ32M88 737 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 FAM27BQ5VT28 67 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 SLC27A4Q6P1M0 643 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 DNM1P34Q6PK57 102 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 PQLC1Q8N2U9 271 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 KRT84Q9NSB2 600 aa23.33■■□□□ 1.33
CCM2-211ENST00000478582 OR6C68A6NDL8 312 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 SAC3D1A6NKF1 404 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 CD3EP07766 207 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 CD40P25942 277 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 POU1F1P28069 291 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 GUCA1AP43080 201 aaPredicted RBP23.32■■□□□ 1.32
CCM2-211ENST00000478582 CAPZA2P47755 286 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 CRISP1P54107 249 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 ESRRGP62508 458 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 PPP2R2BQ00005 443 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 GINS1Q14691 196 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 GSG1Q2KHT4 349 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 MDP1Q86V88 176 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 SDR9C7Q8NEX9 313 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 ZNF75AQ96N20 296 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 SH3GL3Q99963 347 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 CXXC4Q9H2H0 198 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 B9D1Q9UPM9 204 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 FKBP7Q9Y680 259 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 PRR14LQ5THK1 2151 aa23.32■■□□□ 1.32
CCM2-211ENST00000478582 M0R1B8 84 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 RAF1P04049 648 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 LAP3P28838 519 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SGCAQ16586 387 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 ACSM5Q6NUN0 579 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SLC16A14Q7RTX9 510 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 ZBTB46Q86UZ6 589 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 OR6V1Q8N148 313 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SLC37A3Q8NCC5 494 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 FGFBP3Q8TAT2 258 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 HTRA1Q92743 480 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 MBD6Q96DN6 1003 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SLC38A2Q96QD8 506 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 RBM4BQ9BQ04 359 aaKnown RBP23.31■■□□□ 1.32
CCM2-211ENST00000478582 RBM4Q9BWF3 364 aaKnown RBP23.31■■□□□ 1.32
CCM2-211ENST00000478582 RACGAP1Q9H0H5 632 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SEC61A2Q9H9S3 476 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 SLC25A19Q9HC21 320 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 POLE4Q9NR33 117 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 CMC2Q9NRP2 79 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 ENOPH1Q9UHY7 261 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 TMEFF2Q9UIK5 374 aaPredicted RBP23.31■■□□□ 1.32
CCM2-211ENST00000478582 RNF115Q9Y4L5 304 aa23.31■■□□□ 1.32
CCM2-211ENST00000478582 IGLV1-36A0A0B4J1U3 117 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms