RNA–Protein interactions for RNA: ENST00000477531.3

CLDN11-204, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 1,065 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-204ENST00000477531 TMEM158Q8WZ71 300 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 NSMAFQ92636 917 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 HPS1Q92902 700 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 BCL2L14Q9BZR8 327 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 SLCO1C1Q9NYB5 712 aa13.51□□□□□ -0.25
CLDN11-204ENST00000477531 LRP5LA4QPB2 252 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 A6NIZ1 184 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 EFCAB9A8MZ26 197 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 SLC2A10O95528 541 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 SNAP29O95721 258 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 IGFBP1P08833 259 aaPredicted RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 TACSTD2P09758 323 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 CCNOP22674 350 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 APEX1P27695 318 aaKnown RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 SLC7A2P52569 658 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 SEC24CP53992 1094 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 UCP2P55851 309 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 KLF3P57682 345 aaPredicted RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 RAP1BP61224 184 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 RAP1AP62834 184 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 MRPS34P82930 218 aaKnown RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 RIN1Q13671 783 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 MAD2L1BPQ15013 274 aaPredicted RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 THEM4Q5T1C6 240 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 TMEM154Q6P9G4 183 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF730Q6ZMV8 503 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 CBLL1Q75N03 491 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 OAFQ86UD1 273 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 NRMQ8IXM6 262 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 ICA1LQ8NDH6 482 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF519Q8TB69 540 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 HDAC2Q92769 488 aaKnown RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 RDH5Q92781 318 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 FAM162AQ96A26 154 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 CMTM5Q96DZ9 223 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 SNX18Q96RF0 628 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 NDEL1Q9GZM8 345 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 OR51B6Q9H340 312 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 TAAR3PQ9P1P4 343 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 RHCGQ9UBD6 479 aa13.5□□□□□ -0.25
CLDN11-204ENST00000477531 EIF3KQ9UBQ5 218 aaKnown RBP13.5□□□□□ -0.25
CLDN11-204ENST00000477531 MALRD1Q5VYJ5 2156 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 FBN1P35555 2871 aaKnown RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 LYNX1G3V0Z9 82 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 LILRA1O75019 489 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 GMNNO75496 209 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 SERPINA1P01009 418 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 MT-ND5P03915 603 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 LYNX1P0DP58 116 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 NAT2P11245 290 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 DRD4P21917 467 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 ACHEP22303 614 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 IGFBP5P24593 272 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 CDAP32320 146 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 GPR6P46095 362 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 SLC9A3P48764 834 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 NUDT2P50583 147 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 PRKCDQ05655 676 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 PABPC1L2AQ5JQF8 200 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 FAM120AOSQ5T036 256 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 HACD2Q6Y1H2 254 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 ALDH16A1Q8IZ83 802 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 PAQR4Q8N4S7 273 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 ARIH2OSQ8N7S6 290 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 LINC01356Q8N9X3 169 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 OR51A7Q8NH64 312 aa13.49□□□□□ -0.25
CLDN11-204ENST00000477531 ACOT11Q8WXI4 607 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 KCTD14Q9BQ13 255 aaPredicted RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 MYEF2Q9P2K5 600 aaKnown RBP13.49□□□□□ -0.25
CLDN11-204ENST00000477531 TRAV27A0A087WT01 109 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 J3KTA2 159 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 NME4O00746 187 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 IGHMP01871 453 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 HPXP02790 462 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 MMP7P09237 267 aaPredicted RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF250P15622 560 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 MAKP20794 623 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 STOMP27105 288 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 RPL4P36578 427 aaKnown RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 GSK3BP49841 420 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 GDI2P50395 445 aaKnown RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 TMEM33P57088 247 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 PCBD1P61457 104 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 MRPS11P82912 194 aaKnown RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 FMODQ06828 376 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 PCGF3Q3KNV8 242 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 ALKBH6Q3KRA9 238 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 ELFN2Q5R3F8 820 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 SLC25A47Q6Q0C1 308 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 IGFN1Q86VF2 1251 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 HSH2DQ96JZ2 352 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 HINT3Q9NQE9 182 aaKnown RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 RPS6KA6Q9UK32 745 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 FAM32AQ9Y421 112 aaKnown RBP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 SNX13Q9Y5W8 968 aa13.48□□□□□ -0.25
CLDN11-204ENST00000477531 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.48□□□□□ -0.25
CLDN11-204ENST00000477531 XKRYO14609 159 aa13.47□□□□□ -0.25
CLDN11-204ENST00000477531 ZNF32P17041 273 aa13.47□□□□□ -0.25
CLDN11-204ENST00000477531 PCMT1P22061 227 aa13.47□□□□□ -0.25
CLDN11-204ENST00000477531 COL8A2P25067 703 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms