RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 PIGWQ7Z7B1 504 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 PHC2Q8IXK0 858 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 SLC34A3Q8N130 599 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ABHD12Q8N2K0 398 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ZCCHC7Q8N3Z6 543 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 LIX1Q8N485 282 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 TMEM99Q8N816 258 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ACOT4Q8N9L9 421 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 OR9A4Q8NGU2 314 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 CLHC1Q8NHS4 586 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 CHPT1Q8WUD6 406 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 C10orf82Q8WW14 230 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 MR1Q95460 341 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ZNF285Q96NJ3 590 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 TSSK3Q96PN8 268 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 OR52B2Q96RD2 323 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 EBF4Q9BQW3 602 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 THUMPD3Q9BV44 507 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 DDA1Q9BW61 102 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 EBPLQ9BY08 206 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ULBP3Q9BZM4 244 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 DPY30Q9C005 99 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 TUBB1Q9H4B7 451 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 KCNK13Q9HB14 408 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 APMAPQ9HDC9 416 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 MIEF1Q9NQG6 463 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 AIG1Q9NVV5 245 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 MS4A12Q9NXJ0 267 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 DHCR7Q9UBM7 475 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 TRPC4Q9UBN4 977 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 LEF1Q9UJU2 399 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 PSME2Q9UL46 239 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 SATB2Q9UPW6 733 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 ENTPD4Q9Y227 616 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 MRPS2Q9Y399 296 aaKnown RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 NAALAD2Q9Y3Q0 740 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 POMT1Q9Y6A1 747 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 COL27A1Q8IZC6 1860 aaPredicted RBP3.19□□□□□ -1.9
UBR3-209ENST00000477461 CCDC88CQ9P219 2028 aa3.19□□□□□ -1.9
UBR3-209ENST00000477461 COL6A3P12111 3177 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 A0A0A6YYD5 115 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 IGHV3-20A0A0C4DH32 117 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 A0A1W2PRQ8 180 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 A8MXK9 166 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 C4orf51C9J302 202 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ANGPT2O15123 496 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SCAMP2O15127 329 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 CFLARO15519 480 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 CHST10O43529 356 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SCO2O43819 266 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 B4GALT2O60909 372 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 EEDO75530 441 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 MTRF1O75570 445 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 STK17BO94768 372 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SCELO95171 688 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 AIFM1O95831 613 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 RLN1P04808 185 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 IL3P08700 152 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 DUX4L4P0CJ87 422 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SMIM10L1P0DMW3 83 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 BCKDHAP12694 445 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 SDC1P18827 310 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 PRPS1L1P21108 318 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 IL10P22301 178 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 CD82P27701 267 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 PIK3R1P27986 724 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 NTSP30990 170 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 S100A3P33764 101 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ETV5P41161 510 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 XCR1P46094 333 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 OR1D4P47884 311 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ATP4BP51164 291 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 DIO3P55073 304 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 LIM2P55344 173 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 NME5P56597 212 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 CLDN8P56748 225 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ERVK-16P61578 105 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 RPS15P62841 145 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 TNFRSF17Q02223 184 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 GABPB1Q06547 395 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 ACTN3Q08043 901 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 STX4Q12846 297 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 NKAIN1Q4KMZ8 207 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 RFTN2Q52LD8 501 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 AGKQ53H12 422 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 CPTPQ5TA50 214 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 MLIPQ5VWP3 458 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 OR52E8Q6IFG1 317 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 GDPGP1Q6ZNW5 385 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 ANKRD46Q86W74 232 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 PRSS58Q8IYP2 241 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 CA13Q8N1Q1 262 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 NATD1Q8N6N6 113 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 TCEANCQ8N8B7 351 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 OR5T3Q8NGG3 340 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 OR51Q1Q8NH59 317 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 C16orf78Q8WTQ4 265 aa3.18□□□□□ -1.9
UBR3-209ENST00000477461 KIAA1143Q96AT1 154 aaPredicted RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 EXOSC8Q96B26 276 aaKnown RBP3.18□□□□□ -1.9
UBR3-209ENST00000477461 PPCDCQ96CD2 204 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms