RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 NSL1Q96IY1 281 aa13.39□□□□□ -0.27
COMMD6-209ENST00000477377 Q96M85 177 aa13.39□□□□□ -0.27
COMMD6-209ENST00000477377 GPX7Q96SL4 187 aaPredicted RBP13.39□□□□□ -0.27
COMMD6-209ENST00000477377 RHNO1Q9BSD3 238 aa13.39□□□□□ -0.27
COMMD6-209ENST00000477377 NRIP3Q9NQ35 241 aa13.39□□□□□ -0.27
COMMD6-209ENST00000477377 MYEF2Q9P2K5 600 aaKnown RBP13.39□□□□□ -0.27
COMMD6-209ENST00000477377 STX18Q9P2W9 335 aaKnown RBP13.39□□□□□ -0.27
COMMD6-209ENST00000477377 CHD3Q12873 2000 aaKnown RBP13.39□□□□□ -0.27
COMMD6-209ENST00000477377 SVEP1Q4LDE5 3571 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 ABCA1O95477 2261 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 SH3PXD2BA1X283 911 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 B2RBV5 119 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 INAFM1C9JVW0 142 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 FARS2O95363 451 aaKnown RBP13.38□□□□□ -0.27
COMMD6-209ENST00000477377 BMP4P12644 408 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 EVX1P49640 407 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 ZNF84P51523 738 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 SPATS1Q496A3 300 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 FAM27BQ5VT28 67 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 C16orf89Q6UX73 402 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 RINLQ6ZS11 566 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 DPPA2Q7Z7J5 298 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 SLC30A7Q8NEW0 376 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 NSMCE2Q96MF7 247 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 FBXL3Q9UKT7 428 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 FAM32AQ9Y421 112 aaKnown RBP13.38□□□□□ -0.27
COMMD6-209ENST00000477377 CUBNO60494 3623 aa13.38□□□□□ -0.27
COMMD6-209ENST00000477377 TCRBV5S2A0A599 114 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 SLC22A23A1A5C7 686 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 H7C1C5 153 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 ZNF32P17041 273 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 ATP6V1B2P21281 511 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 LCN6P62502 163 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 PSG4Q00888 419 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 MS4A2Q01362 244 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 LOXL1Q08397 574 aaPredicted RBP13.37□□□□□ -0.27
COMMD6-209ENST00000477377 CD47Q08722 323 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 ENDOGQ14249 297 aaKnown RBP13.37□□□□□ -0.27
COMMD6-209ENST00000477377 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 FAM205BPQ63HN1 556 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 CLEC2AQ6UVW9 174 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 FAM168AQ92567 244 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 RBP7Q96R05 134 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 VRK1Q99986 396 aaPredicted RBP13.37□□□□□ -0.27
COMMD6-209ENST00000477377 RNF121Q9H920 327 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 ADAM21Q9UKJ8 722 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 CMAHPQ9Y471 501 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 NAV3Q8IVL0 2385 aa13.37□□□□□ -0.27
COMMD6-209ENST00000477377 LOC100509620A0A075B734 347 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 A6NIZ1 184 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 SNAP29O95721 258 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 APEX1P27695 318 aaKnown RBP13.36□□□□□ -0.27
COMMD6-209ENST00000477377 LAP3P28838 519 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 HMGA2P52926 109 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 RAP1BP61224 184 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 ERVS71-1P61550 626 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 RAP1AP62834 184 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 SGCAQ16586 387 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 PABPC1L2AQ5JQF8 200 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 TMEM255AQ5JRV8 349 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 FGD3Q5JSP0 725 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 GKAP1Q5VSY0 366 aaPredicted RBP13.36□□□□□ -0.27
COMMD6-209ENST00000477377 TMEM53Q6P2H8 277 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 UGT2A3Q6UWM9 527 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 RRM2BQ7LG56 351 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 FNDC8Q8TC99 324 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 RASD2Q96D21 266 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 RSRC1Q96IZ7 334 aaKnown RBP13.36□□□□□ -0.27
COMMD6-209ENST00000477377 POM121L2Q96KW2 1035 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 FOXN4Q96NZ1 517 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 WNT5BQ9H1J7 359 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 NDE1Q9NXR1 346 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 ACTR3BQ9P1U1 418 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 IL20RAQ9UHF4 553 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 SLC7A8Q9UHI5 535 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 FZR1Q9UM11 496 aa13.36□□□□□ -0.27
COMMD6-209ENST00000477377 PRSS37A4D1T9 235 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CD5LO43866 347 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 ENTPD5O75356 428 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 GMNNO75496 209 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 NDUFB2O95178 105 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 TXNDC12O95881 172 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 ADRA2AP08913 450 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CST2P09228 141 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 FAM157BP0CG42 384 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 SLC25A16P16260 332 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CTLA4P16410 223 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 ITGA2P17301 1181 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 PCSK6P29122 969 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 RPL4P36578 427 aaKnown RBP13.35□□□□□ -0.27
COMMD6-209ENST00000477377 WNT5AP41221 380 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CDKN2AP42771 156 aaKnown RBP13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 PTCHD4Q6ZW05 846 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 PRIMA1Q86XR5 153 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 CCDC197Q8NCU1 140 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 AKR7LQ8NHP1 331 aa13.35□□□□□ -0.27
COMMD6-209ENST00000477377 SYT3Q9BQG1 590 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms