RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	VANGL2	Q9ULK5	521 aa		2.6	□□□□□ -1.99
RBM39-231	ENST00000477334	MYO10	Q9HD67	2058 aa		2.6	□□□□□ -1.99
RBM39-231	ENST00000477334	PHLPP2	Q6ZVD8	1323 aa		2.6	□□□□□ -1.99
RBM39-231	ENST00000477334	IGKV2D-24	A0A075B6R9	120 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	OTC	P00480	354 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	CSF3	P09919	207 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	GKN3P	P0CG01	181 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	MYL2	P10916	166 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	PRKACA	P17612	351 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	MAG	P20916	626 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	KITLG	P21583	273 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	LONP1	P36776	959 aa	Known RBP	2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	CXCL5	P42830	114 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	BCAP31	P51572	246 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	CARD18	P57730	90 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	LINC00315	P59091	139 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	EIF3E	P60228	445 aa	Known RBP	2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	ACTA1	P68133	377 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	SMARCB1	Q12824	385 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	SGCA	Q16586	387 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	RSPO1	Q2MKA7	263 aa	Predicted RBP	2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	C16orf87	Q6PH81	154 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	TPRX1	Q8N7U7	411 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	VN1R2	Q8NFZ6	395 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	GPR151	Q8TDV0	419 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	ACMSD	Q8TDX5	336 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	KIAA1143	Q96AT1	154 aa	Predicted RBP	2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	DNAJC19	Q96DA6	116 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	ASB9	Q96DX5	294 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	C12orf42	Q96LP6	360 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	PRRC1	Q96M27	445 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	RGCC	Q9H4X1	137 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	XKR8	Q9H6D3	395 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	NIPAL2	Q9H841	368 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	MRPL47	Q9HD33	250 aa	Known RBP	2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	ADAP2	Q9NPF8	381 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	XCL2	Q9UBD3	114 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	CFAP45	Q9UL16	551 aa		2.59	□□□□□ -1.99
RBM39-231	ENST00000477334	ASTN1	O14525	1302 aa		2.59	□□□□□ -2
RBM39-231	ENST00000477334	TRAV25	A0A0B4J276	109 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	LRRIQ3	A6PVS8	624 aa	Predicted RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	PEX7	O00628	323 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	DLGAP1	O14490	977 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	NEMF	O60524	1076 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	OR2F2	O95006	317 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	FGFR1OP	O95684	399 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	TMEM50A	O95807	157 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	MB	P02144	154 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	ANXA5	P08758	320 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	UBTFL1	P0CB47	393 aa	Predicted RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	CCNB1	P14635	433 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	BMI1	P35226	326 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	ATP5C1	P36542	298 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	NAMPT	P43490	491 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	CDKN1B	P46527	198 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	RPS9	P46781	194 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	SLC11A1	P49279	550 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	FGF8	P55075	233 aa	Predicted RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	DMTN	Q08495	405 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	GNMT	Q14749	295 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	STK38	Q15208	465 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	STK11	Q15831	433 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	DGUOK	Q16854	277 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	HSP90AA4P	Q58FG1	418 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	C9orf135	Q5VTT2	229 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	TRIM40	Q6P9F5	258 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	VTCN1	Q7Z7D3	282 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	MMAA	Q8IVH4	418 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	ZADH2	Q8N4Q0	377 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	B3GNT7	Q8NFL0	401 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	OR8K3	Q8NH51	312 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	ZNF596	Q8TC21	504 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	LRRC39	Q96DD0	335 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	CCDC126	Q96EE4	140 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	TAAR1	Q96RJ0	339 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	ECSIT	Q9BQ95	431 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	FAIM2	Q9BWQ8	316 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	TEKT3	Q9BXF9	490 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	TPK1	Q9H3S4	243 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	LYAR	Q9NX58	379 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	PEF1	Q9UBV8	284 aa	Known RBP	2.58	□□□□□ -2
RBM39-231	ENST00000477334	TBC1D24	Q9ULP9	559 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	COMMD3-BMI1	R4GMX3	469 aa		2.58	□□□□□ -2
RBM39-231	ENST00000477334	PIKFYVE	Q9Y2I7	2098 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334		A0A1W2PPE3	182 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334		H3BNH8	94 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	TEX46	H3BTG2	121 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	NVL	O15381	856 aa	Known RBP	2.57	□□□□□ -2
RBM39-231	ENST00000477334	CD5L	O43866	347 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	OR7A10	O76100	309 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	IGLV2-23	P01705	113 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	GAPDH	P04406	335 aa	Known RBP	2.57	□□□□□ -2
RBM39-231	ENST00000477334	TCN1	P20061	433 aa	Predicted RBP	2.57	□□□□□ -2
RBM39-231	ENST00000477334	RORA	P35398	523 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	GPR6	P46095	362 aa	Predicted RBP	2.57	□□□□□ -2
RBM39-231	ENST00000477334	NPBWR2	P48146	333 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	CX3CR1	P49238	355 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	CLDN8	P56748	225 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	KRTAP10-1	P60331	282 aa		2.57	□□□□□ -2
RBM39-231	ENST00000477334	PFN3	P60673	137 aa		2.57	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms