RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 ERVK-25P63136 954 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TPBGQ13641 420 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ACKR1Q16570 336 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 GPR139Q6DWJ6 353 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 RTL6Q6ICC9 239 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 NHLRC1Q6VVB1 395 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 RPTNQ6XPR3 784 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SLC35D2Q76EJ3 337 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SHFQ7M4L6 423 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 DOLPP1Q86YN1 238 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 MCEMP1Q8IX19 187 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF485Q8NCK3 441 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 RFKQ969G6 155 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TEX12Q9BXU0 123 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TXNIPQ9H3M7 391 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 RNF122Q9H9V4 155 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SMURF1Q9HCE7 757 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 EMC3Q9P0I2 261 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ING1Q9UK53 422 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ADAM18Q9Y3Q7 739 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 FAM215AQ9Y5M1 114 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 IER3IP1Q9Y5U9 82 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 MBD3L4A6NDZ8 208 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 MBD3L3A6NE82 208 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 MBD3L5A6NJ08 208 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 GPR171O14626 319 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 IMPA2O14732 288 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 IDH3BO43837 385 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 HMGN1P05114 100 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SDHAP31040 664 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 RPL27P61353 136 aaKnown RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 EEF1A1P5Q5VTE0 462 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 CREB3L2Q70SY1 520 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 FAM122BQ7Z309 247 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 MBD3L2Q8NHZ7 208 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ERMAPQ96PL5 475 aaPredicted RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TSPAN32Q96QS1 320 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TM9SF2Q99805 663 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SP140LQ9H930 580 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 BCO1Q9HAY6 547 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 GLRX2Q9NS18 164 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 EXOGQ9Y2C4 368 aaKnown RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 SF3B6Q9Y3B4 125 aaKnown RBP11.75□□□□□ -0.53
PSMB4-204ENST00000476467 FLVCR1Q9Y5Y0 555 aa11.75□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF724A8MTY0 619 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 AKAP8O43823 692 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 SLC2A10O95528 541 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 TXNDC12O95881 172 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 IFNGR1P15260 489 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 HTR1FP30939 366 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 RORCP51449 518 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 CASP6P55212 293 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 FAM205BPQ63HN1 556 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 OR2A2Q6IF42 318 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 HDDC2Q7Z4H3 204 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 C9orf106Q8NAJ2 232 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 BBS1Q8NFJ9 593 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ASB10Q8WXI3 467 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 Q96M85 177 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 HINT3Q9NQE9 182 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 GRHPRQ9UBQ7 328 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF346Q9UL40 294 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ARHGAP21Q5T5U3 1957 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 TEX13CA0A0J9YWL9 993 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 B8ZZF3 427 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 LOC110117498-PIK3R3F6TDL0 507 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 IGHA1P01876 353 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 NOS3P29474 1203 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 TNFSF8P32971 234 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 CD79BP40259 229 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 CLDN17P56750 224 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 RPS25P62851 125 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 KRR1Q13601 381 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 MELKQ14680 651 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ARMC4Q5T2S8 1044 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 NXNL2Q5VZ03 156 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 CADM3Q8N126 398 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF843Q8N446 348 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ARIH2OSQ8N7S6 290 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ZIC4Q8N9L1 334 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 OR4F15Q8NGB8 312 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF519Q8TB69 540 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 GATAD2BQ8WXI9 593 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 TMEM45BQ96B21 275 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 GMPPAQ96IJ6 420 aaPredicted RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ADAD1Q96M93 576 aaKnown RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 SDHCQ99643 169 aaPredicted RBP11.74□□□□□ -0.53
PSMB4-204ENST00000476467 ZNF649Q9BS31 505 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 SNTG1Q9NSN8 517 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 MED29Q9NX70 200 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 RCE1Q9Y256 329 aa11.74□□□□□ -0.53
PSMB4-204ENST00000476467 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
PSMB4-204ENST00000476467 A6NIZ1 184 aa11.73□□□□□ -0.53
PSMB4-204ENST00000476467 SS18L1O75177 396 aaPredicted RBP11.73□□□□□ -0.53
PSMB4-204ENST00000476467 IL1AP01583 271 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms