RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 DPPA2Q7Z7J5 298 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 PAQR4Q8N4S7 273 aaPredicted RBP18.25■□□□□ 0.51
LIME1-204ENST00000476183 GPA33Q99795 319 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 RNF121Q9H920 327 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 SIAEQ9HAT2 523 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 SIGLEC7Q9Y286 467 aa18.25■□□□□ 0.51
LIME1-204ENST00000476183 A6NIZ1 184 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 CD14P08571 375 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 IGFBP1P08833 259 aaPredicted RBP18.24■□□□□ 0.51
LIME1-204ENST00000476183 T-ENOLP0DO92 83 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 CCL2P13500 99 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 ITGA2P17301 1181 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 ATP6V1B2P21281 511 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 RPL4P36578 427 aaKnown RBP18.24■□□□□ 0.51
LIME1-204ENST00000476183 PPOXP50336 477 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 MNAT1P51948 309 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 FXYD6P3P58550 94 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 DSCR9P59020 149 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 RAP1BP61224 184 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 RAP1AP62834 184 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 THEM4Q5T1C6 240 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 THSD4Q6ZMP0 1018 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 FAM122BQ7Z309 247 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 ARIH2OSQ8N7S6 290 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 SLC30A7Q8NEW0 376 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 Q96M85 177 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 RBP7Q96R05 134 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 VRK1Q99986 396 aaPredicted RBP18.24■□□□□ 0.51
LIME1-204ENST00000476183 MRPL37Q9BZE1 423 aaKnown RBP18.24■□□□□ 0.51
LIME1-204ENST00000476183 CMAHPQ9Y471 501 aa18.24■□□□□ 0.51
LIME1-204ENST00000476183 CHD3Q12873 2000 aaKnown RBP18.23■□□□□ 0.51
LIME1-204ENST00000476183 SH3PXD2BA1X283 911 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 NR2C1P13056 603 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 GLRXP35754 106 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 SPIBQ01892 262 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 SGCAQ16586 387 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 MESTQ5EB52 335 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 CYP2R1Q6VVX0 501 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 RINLQ6ZS11 566 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 ZCCHC24Q8N2G6 241 aaKnown RBP18.23■□□□□ 0.51
LIME1-204ENST00000476183 C10orf105Q8TEF2 133 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 MRPL24Q96A35 216 aaKnown RBP18.23■□□□□ 0.51
LIME1-204ENST00000476183 RSRC1Q96IZ7 334 aaKnown RBP18.23■□□□□ 0.51
LIME1-204ENST00000476183 IL20RAQ9UHF4 553 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 SPEF1Q9Y4P9 236 aa18.23■□□□□ 0.51
LIME1-204ENST00000476183 VSTM5A8MXK1 200 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 MGRN1O60291 552 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 FABP3P05413 133 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 ZNF32P17041 273 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 GALK2Q01415 458 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 FOXL2NBQ6ZUU3 175 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 ZER1Q7Z7L7 766 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 LRP11Q86VZ4 500 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 CPEB3Q8NE35 698 aaKnown RBP18.22■□□□□ 0.51
LIME1-204ENST00000476183 FNDC8Q8TC99 324 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 FAM168AQ92567 244 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 MCUR1Q96AQ8 359 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 IL1RAPQ9NPH3 570 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 GRHPRQ9UBQ7 328 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 SLC7A8Q9UHI5 535 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 ADAM21Q9UKJ8 722 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 FZR1Q9UM11 496 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 JMJD1CQ15652 2540 aa18.22■□□□□ 0.51
LIME1-204ENST00000476183 ABCA2Q9BZC7 2435 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 YLPM1P49750 1951 aaKnown RBP18.21■□□□□ 0.51
LIME1-204ENST00000476183 TEX13CA0A0J9YWL9 993 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 SLC22A23A1A5C7 686 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 UNC119BA6NIH7 251 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 NDUFB2O95178 105 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 GADD45GO95257 159 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 SCG5P05408 212 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 CALB2P22676 271 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 APEX1P27695 318 aaKnown RBP18.21■□□□□ 0.51
LIME1-204ENST00000476183 LAP3P28838 519 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 PABPC1L2AQ5JQF8 200 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 FAM27BQ5VT28 67 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 RASD2Q96D21 266 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 ZNF570Q96NI8 536 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 GPX7Q96SL4 187 aaPredicted RBP18.21■□□□□ 0.51
LIME1-204ENST00000476183 NRIP3Q9NQ35 241 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 ACTR3BQ9P1U1 418 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 AURKCQ9UQB9 309 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 FKBP7Q9Y680 259 aa18.21■□□□□ 0.51
LIME1-204ENST00000476183 IMPA2O14732 288 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 FAM157BP0CG42 384 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 RRM2P31350 389 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 SMIM11AP58511 58 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 HSF2Q03933 536 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 ZDHHC21Q8IVQ6 265 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 SYT3Q9BQG1 590 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 KCNN2Q9H2S1 579 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 OR51B6Q9H340 312 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 C1orf198Q9H425 327 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 CDH20Q9HBT6 801 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 CCNB1IP1Q9NPC3 277 aa18.2■□□□□ 0.5
LIME1-204ENST00000476183 MYEF2Q9P2K5 600 aaKnown RBP18.2■□□□□ 0.5
LIME1-204ENST00000476183 IQCMA0A1B0GVH7 501 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 A0A1W2PPL8 197 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 TCRBV5S2A0A599 114 aa18.19■□□□□ 0.5
LIME1-204ENST00000476183 PRSS37A4D1T9 235 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms