RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 METRNQ9UJH8 293 aa10.44□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 KLHL21Q9UJP4 597 aa10.44□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 BAG5Q9UL15 447 aa10.44□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SH3GLB1Q9Y371 365 aa10.44□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TANC2Q9HCD6 1990 aa10.44□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LOC100509620A0A075B734 347 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 A0A1W2PRG6 482 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 PPIHO43447 177 aaKnown RBP10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 AVPP01185 164 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 UMPSP11172 480 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 FUT4P22083 530 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SRP14P37108 136 aaKnown RBP10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 WNT5AP41221 380 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 DAP3P51398 398 aaKnown RBP10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MMP15P51511 669 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ZNF84P51523 738 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CCL8P80075 99 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ALKBH6Q3KRA9 238 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 PABPC1L2AQ5JQF8 200 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 FAM27BQ5VT28 67 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 FOXL2NBQ6ZUU3 175 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 HDDC2Q7Z4H3 204 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ZNF101Q8IZC7 436 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LRRC18Q8N456 261 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LRRC75AQ8NAA5 344 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 RBM15BQ8NDT2 890 aaKnown RBP10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 C10orf82Q8WW14 230 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SGTBQ96EQ0 304 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MARS2Q96GW9 593 aaKnown RBP10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SH3GL1Q99961 368 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 RNF121Q9H920 327 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CDH20Q9HBT6 801 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 GPR160Q9UJ42 338 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 A4GNTQ9UNA3 340 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 HIF3AQ9Y2N7 669 aa10.43□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TRAV20A0A0B4J274 112 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 A0A0G2JND7 137 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 IQCMA0A1B0GVH7 501 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 A0A1W2PPW3 197 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 HTR3EA5X5Y0 456 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SHOX2O60902 331 aaPredicted RBP10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SLC2A10O95528 541 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 IGHMP01871 453 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LCKP06239 509 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ADH4P08319 380 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TROVE2P10155 538 aaKnown RBP eCLIP10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ZNF32P17041 273 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 STOMP27105 288 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CDAP32320 146 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 OR1E2P47887 323 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SELENOVP59797 346 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 PSG4Q00888 419 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 PLP2Q04941 152 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TAF11Q15544 211 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 NKPD1Q17RQ9 610 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MBNL2Q5VZF2 373 aaKnown RBP10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ERICH5Q6P6B1 374 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 RINLQ6ZS11 566 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 OR51F2Q8NH61 342 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 GTF3AQ92664 365 aaKnown RBP10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LRRC37BQ96QE4 947 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ECSITQ9BQ95 431 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 LRMDAQ9H2I8 198 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 NARFLQ9H6Q4 476 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SAR1AQ9NR31 198 aa10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 STX18Q9P2W9 335 aaKnown RBP10.42□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 IGHV1-69-2A0A0G2JMI3 117 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MCIDASD6RGH6 385 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CDC14BO60729 498 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 IGHV2-5P01817 119 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 KDELR2P33947 212 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 APLNRP35414 380 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 COMPP49747 757 aaPredicted RBP10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TAS2R41P59536 307 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 SELENOWP63302 87 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 FMODQ06828 376 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 KLF10Q13118 480 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MOGQ16653 247 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CYBRD1Q53TN4 286 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 FAM209AQ5JX71 171 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 THEM4Q5T1C6 240 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CGB2Q6NT52 195 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ACSM5Q6NUN0 579 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TMEM154Q6P9G4 183 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 USP43Q70EL4 1123 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 C1orf174Q8IYL3 243 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ALG12Q9BV10 488 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TMEM120AQ9BXJ8 343 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 TMPRSS13Q9BYE2 586 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 WNT5BQ9H1J7 359 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 OR51B6Q9H340 312 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 CCDC134Q9H6E4 229 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 METTL17Q9H7H0 456 aaPredicted RBP10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 ZNF665Q9H7R5 613 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MAN2C1Q9NTJ4 1040 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 MED31Q9Y3C7 131 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 GRIP1Q9Y3R0 1128 aa10.41□□□□□ -0.74
MSH5-SAPCD1-205ENST00000476085 WIPI2Q9Y4P8 454 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms