RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 C1DQ13901 141 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 HSPB2Q16082 182 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 CNPY1Q3B7I2 92 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ARMCX4Q5H9R4 360 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 RIPPLY2Q5TAB7 128 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 OR2G6Q5TZ20 316 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 GPR107Q5VW38 600 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF324BQ6AW86 544 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 LRFN4Q6PJG9 635 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 DNM1P34Q6PK57 102 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TMPRSS11AQ6ZMR5 421 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 GDPGP1Q6ZNW5 385 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 RHOUQ7L0Q8 258 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SHFQ7M4L6 423 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KCTD20Q7Z5Y7 419 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 LHFPL3Q86UP9 236 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 CLVS1Q8IUQ0 354 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 PHC2Q8IXK0 858 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SLC35F2Q8IXU6 374 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 C20orf196Q8IYI0 205 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KLHL36Q8N4N3 616 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 OTOSQ8NHW6 89 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 HAVCR2Q8TDQ0 301 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 OTULINQ96BN8 352 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 DACH2Q96NX9 599 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF385AQ96PM9 386 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 RBP7Q96R05 134 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 OR2M2Q96R28 347 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TAAR6Q96RI8 345 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 MYCBPQ99417 103 aaPredicted RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KRTAP9-4Q9BYQ2 154 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 WDR76Q9H967 626 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SIAEQ9HAT2 523 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SRA1Q9HD15 236 aaKnown RBP5.87□□□□□ -1.47
ATG4A-207ENST00000474825 NDUFB11Q9NX14 153 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 BABAM2Q9NXR7 383 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 SPRR3Q9UBC9 169 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 KCNG2Q9UJ96 466 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TUBD1Q9UJT1 453 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF175Q9Y473 711 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 UGT2A1Q9Y4X1 527 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 LIPGQ9Y5X9 500 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 TMEM14AQ9Y6G1 99 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 BOD1L1Q8NFC6 3051 aa5.87□□□□□ -1.47
ATG4A-207ENST00000474825 ALPK2Q86TB3 2170 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ARPC4-TTLL3A0A0A6YYG9 625 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 DAPL1A0PJW8 107 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 OR14I1A6ND48 311 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF726A6NNF4 738 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 H7C1C5 153 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 K7EM74 188 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 GPR171O14626 319 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 PHYHO14832 338 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 PLPP2O43688 288 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 AKAP8O43823 692 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 SELENOFO60613 162 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 SLC16A7O60669 478 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ABHD16AO95870 558 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 MT-ND5P03915 603 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 CD36P16671 472 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ZNF24P17028 368 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 UGT2B10P36537 528 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ATP6V1E1P36543 226 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 CD79BP40259 229 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 CRYBB2P43320 205 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 EIF1AXP47813 144 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 TGM4P49221 684 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 CLDN17P56750 224 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 RPS7P62081 194 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 LCN6P62502 163 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ACTA2P62736 377 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ACTG2P63267 376 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 HIST1H3AP68431 136 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 GLO1Q04760 184 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 EGR3Q06889 387 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 MRPL28Q13084 256 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 GUSBP1Q15486 140 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 MED22Q15528 200 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ETFDHQ16134 617 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 TUSC1Q2TAM9 212 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 NRN1LQ496H8 165 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 CCDC58Q4VC31 144 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 SOWAHCQ53LP3 525 aaPredicted RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 HIST2H3PS2Q5TEC6 136 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 FDX2Q6P4F2 183 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 DEGS2Q6QHC5 323 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 HIST2H3AQ71DI3 136 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 FCRLAQ7L513 359 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 SSX6Q7RTT6 188 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 P2RY8Q86VZ1 359 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ERI1Q8IV48 349 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 GLB1L2Q8IW92 636 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 OR51L1Q8NGJ5 315 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 SPRYD4Q8WW59 207 aaPredicted RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 GATAD2BQ8WXI9 593 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 MCHR2Q969V1 340 aa5.86□□□□□ -1.47
ATG4A-207ENST00000474825 C12orf43Q96C57 262 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 MRPL48Q96GC5 212 aaKnown RBP5.86□□□□□ -1.47
ATG4A-207ENST00000474825 ABHD17AQ96GS6 310 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms