RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 RESP18Q5W5W9 173 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 WDR25Q64LD2 544 aaPredicted RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 FAM214BQ7L5A3 538 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 NUFIP2Q7Z417 695 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 ZC3HC1Q86WB0 502 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC34A3Q8N130 599 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 DAW1Q8N136 415 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 OR9Q2Q8NGE9 314 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MBD3L2Q8NHZ7 208 aaPredicted RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MAPK15Q8TD08 544 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 KCNJ9Q92806 393 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 MSI2Q96DH6 328 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 DCLRE1CQ96SD1 692 aaKnown RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 KLF6Q99612 283 aaPredicted RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 OSBPL11Q9BXB4 747 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 LAT2Q9GZY6 243 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 FKRPQ9H9S5 495 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 TMEM27Q9HBJ8 222 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 NLE1Q9NVX2 485 aaPredicted RBP5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 SH2B3Q9UQQ2 575 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 RNF115Q9Y4L5 304 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 NCANO14594 1321 aa5.46□□□□□ -1.54
SMARCE1-208ENST00000474246 OR6C68A6NDL8 312 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 OR6C6A6NF89 314 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 HPGDSO60760 199 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CREG1O75629 220 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 EGFP01133 1207 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ATXN1LP0C7T5 689 aaKnown RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 FOLR1P15328 257 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CELP19835 753 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 NR4A1P22736 598 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 GDF1P27539 372 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 UQCRC1P31930 480 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PRLHRP49683 370 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ATP1B3P54709 279 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RPL11P62913 178 aaKnown RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ID3Q02535 119 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ST3GAL3Q11203 375 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 BTN1A1Q13410 526 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SLBPQ14493 270 aaKnown RBP eCLIP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PABPC1L2AQ5JQF8 200 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SERTAD4-AS1Q5TG53 156 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SAMD13Q5VXD3 122 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 LIPKQ5VXJ0 399 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 REP15Q6BDI9 236 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 HIST2H2BCQ6DN03 193 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 TCTN3Q6NUS6 607 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ATRAIDQ6UW56 229 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 QSOX2Q6ZRP7 698 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CDHR3Q6ZTQ4 885 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC35F6Q8N357 371 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 C12orf45Q8N5I9 185 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 GDPD1Q8N9F7 314 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF383Q8NA42 475 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 OR52I2Q8NH67 350 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ABHD4Q8TB40 342 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CLEC4CQ8WTT0 213 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 TFGQ92734 400 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RORBQ92753 470 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CTHRC1Q96CG8 243 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF382Q96SR6 550 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC2A11Q9BYW1 496 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 AMBRA1Q9C0C7 1298 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC39A8Q9C0K1 460 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ASB6Q9NWX5 421 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SSR3Q9UNL2 185 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 B3GALT5Q9Y2C3 310 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 A0A1W2PRD5 423 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RNF222A6NCQ9 220 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 MPTX1A8MV57 137 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 C21orf140B9A014 251 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ANKRD63C9JTQ0 380 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 C5orf67F2Z3F1 127 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 I3L521 148 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RAD51CO43502 376 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PRAF2O60831 178 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF217O75362 1048 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 IGSF6O95976 241 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 IFNA17P01571 189 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 NR3C1P04150 777 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PRNPP04156 253 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF35P13682 527 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 EPHA2P29317 976 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 KIR2DL2P43627 348 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CDKN2DP55273 166 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 MTCP1P56278 107 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RAB10P61026 200 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 RAE1P78406 368 aaKnown RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 BTN3A2P78410 334 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 HSF1Q00613 529 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 MST1LQ2TV78 715 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 OTUD3Q5T2D3 398 aaPredicted RBP5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 ATAD3CQ5T2N8 411 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PRAMEF17Q5VTA0 474 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 NSUN5P2Q63ZY6 315 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 TMEM205Q6UW68 189 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 CD164L2Q6UWJ8 174 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 PLXDC2Q6UX71 529 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 C19orf35Q6ZS72 473 aa5.45□□□□□ -1.54
SMARCE1-208ENST00000474246 SSX6Q7RTT6 188 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms