RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 POU2AF1Q16633 256 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 PRSS8Q16651 343 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 VAX1Q5SQQ9 334 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ANKRD22Q5VYY1 191 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 CENPPQ6IPU0 288 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 DUX4L9Q6RFH8 374 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 LINC00173Q6ZV60 143 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 NEGR1Q7Z3B1 354 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 PDIK1LQ8N165 341 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 STPG2Q8N412 459 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 LIX1Q8N485 282 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 NECAB1Q8N987 351 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 SPATA4Q8NEY3 305 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 OR10R2Q8NGX6 335 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 LRRC58Q96CX6 371 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 OR10C1Q96KK4 312 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF382Q96SR6 550 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 FMO2Q99518 471 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ILKAPQ9H0C8 392 aaPredicted RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 SIRT7Q9NRC8 400 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 ZNF355PQ9NSJ1 428 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 DDX19AQ9NUU7 478 aaKnown RBP1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 SUN2Q9UH99 717 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 NUP50Q9UKX7 468 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 KIAA1257Q9ULG3 409 aa1.84□□□□□ -2.11
ECHDC1-213ENST00000474240 PTPRTO14522 1441 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TRAV6A0A075B6T7 132 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 A0A1B0GVX0 72 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 A0A1W2PPV9 198 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TMEM223A0PJW6 202 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 CDC7O00311 574 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 CXCL11O14625 94 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 PPP1R2P9O14990 202 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RBFOX2O43251 390 aaKnown RBP eCLIP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 CDC40O60508 579 aaKnown RBP eCLIP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 EEDO75530 441 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 SURF6O75683 361 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TLX1NBP0CAT3 122 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF286BP0CG31 522 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 PRPS2P11908 318 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RAB3BP20337 219 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 PTMSP20962 102 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 F2RP25116 425 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TNNT2P45379 298 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 BST2Q10589 180 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 MOBPQ13875 183 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 PIGHQ14442 188 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 PPP1R7Q15435 360 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TGFBIQ15582 683 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 GALNT17Q6IS24 598 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF880Q6PDB4 577 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 SLC25A34Q6PIV7 304 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RGS9BPQ6ZS82 235 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 SHISA6Q6ZSJ9 500 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 ASCL5Q7RTU5 278 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 NANOGNBQ7Z5D8 188 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 UBE2J2Q8N2K1 259 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 UBE2Q2Q8WVN8 375 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 NTAN1Q96AB6 310 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RTBDNQ9BSG5 229 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TCHPQ9BT92 498 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 ROPN1BQ9BZX4 212 aaPredicted RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RPF2Q9H7B2 306 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 SYNDIG1Q9H7V2 258 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 GPATCH2LQ9NWQ4 482 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 UVRAGQ9P2Y5 699 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TRMT112Q9UI30 125 aaKnown RBP1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 GGA2Q9UJY4 613 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 TMED5Q9Y3A6 229 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 RFNGQ9Y644 331 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 MAPK8IP3Q9UPT6 1336 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 IGSF9BQ9UPX0 1349 aa1.83□□□□□ -2.12
ECHDC1-213ENST00000474240 IGKV1D-17A0A075B6S4 117 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 BTBD17A6NE02 478 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 HIDE1A8MVS5 230 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 RAD51BO15315 384 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 SRP72O76094 671 aaKnown RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 SERPIND1P05546 499 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 C1GALT1C1LP0DN25 315 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 SLC2A3P11169 496 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 NCF2P19878 526 aaPredicted RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 KITLGP21583 273 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 ATP5IP56385 69 aaPredicted RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 GPX6P59796 221 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 NUTF2P61970 127 aaKnown RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 YWHAGP61981 247 aaKnown RBP eCLIP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 UBE2HP62256 183 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 PPIL2Q13356 520 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 FAM78AQ5JUQ0 283 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 PHYHD1Q5SRE7 291 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 TBC1D21Q8IYX1 336 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 EID2Q8N6I1 236 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF461Q8TAF7 563 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 NARS2Q96I59 477 aaKnown RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 CAMK2N2Q96S95 79 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 PKIBQ9C010 78 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 UBE2ZQ9H832 354 aaPredicted RBP1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 ZNF835Q9Y2P0 537 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 GOLT1BQ9Y3E0 138 aa1.82□□□□□ -2.12
ECHDC1-213ENST00000474240 COL1A2P08123 1366 aa1.82□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms