RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 ZNF702PQ9H963 129 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 APMAPQ9HDC9 416 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 UFSP2Q9NUQ7 469 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 PAK1IP1Q9NWT1 392 aaPredicted RBP3.16□□□□□ -1.9
CNOT4-209ENST00000473470 TBK1Q9UHD2 729 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 PPIAL4AQ9Y536 164 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 PTPRJQ12913 1337 aa3.16□□□□□ -1.9
CNOT4-209ENST00000473470 CACNA1CQ13936 2221 aa3.15□□□□□ -1.9
CNOT4-209ENST00000473470 ZNF705EA8MWA4 302 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 HDAC3O15379 428 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NVLO15381 856 aaKnown RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 HCRTO43612 131 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 TRAPPC3O43617 180 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 DFNA5O60443 496 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF254O75437 659 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 SERF1AO75920 110 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 LRATO95237 230 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 IGHG4P01861 327 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 P0C879 139 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF44P15621 663 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 MGMTP16455 207 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 LAP3P28838 519 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 KIR2DS2P43631 304 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 P2RY1P47900 373 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 ACTR1AP61163 376 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 ART3Q13508 389 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 KIAA0040Q15053 153 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 C10orf120Q5SQS8 335 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 RGS9BPQ6ZS82 235 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NLRP9Q7RTR0 991 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 TPRA1Q86W33 373 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 KIR3DL3Q8N743 410 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 OR2A12Q8NGT7 310 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 OR1F12Q8NHA8 337 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF606Q8WXB4 792 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 PIGCQ92535 297 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 HAVCR1Q96D42 359 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 COQ2Q96H96 371 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NOL4LQ96MY1 436 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 CATSPER2Q96P56 530 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 MAPKAP1Q9BPZ7 522 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 SLC35A5Q9BS91 424 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NIPSNAP3BQ9BS92 247 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 CALN1Q9BXU9 219 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NAT10Q9H0A0 1025 aaKnown RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 NXF5Q9H1B4 397 aaKnown RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 TCEAL2Q9H3H9 227 aaPredicted RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 SMYD3Q9H7B4 428 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 PSTPIP2Q9H939 334 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 SMOXQ9NWM0 555 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 OR1A1Q9P1Q5 309 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 KLHL21Q9UJP4 597 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 AK6Q9Y3D8 172 aaKnown RBP3.15□□□□□ -1.91
CNOT4-209ENST00000473470 RYR2Q92736 4967 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 UNC13CQ8NB66 2214 aa3.15□□□□□ -1.91
CNOT4-209ENST00000473470 UBR4Q5T4S7 5183 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 CITO14578 2027 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 IGKV6-21A0A0C4DH24 114 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SMIM28A0A1B0GU29 152 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 A0A1B0GWB2 263 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ARGFXA6NJG6 315 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 HIP1O00291 1037 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 WWP2O00308 870 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 PRKYO43930 277 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SNNO75324 88 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-209ENST00000473470 MTX2O75431 263 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 PNMTP11086 282 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 IGLL1P15814 213 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 MMP11P24347 488 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 PRKXP51817 358 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 HNRNPA3P51991 378 aaKnown RBP3.14□□□□□ -1.91
CNOT4-209ENST00000473470 UBE2HP62256 183 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 RPS14P62263 151 aaKnown RBP3.14□□□□□ -1.91
CNOT4-209ENST00000473470 NDPQ00604 133 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 CEP55Q53EZ4 464 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF658Q5TYW1 1059 aaPredicted RBP3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ZSCAN25Q6NSZ9 544 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF677Q86XU0 584 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SKA3Q8IX90 412 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SLC38A6Q8IZM9 456 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 OR51G2Q8NGK0 314 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 LMX1AQ8TE12 382 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 FGGYQ96C11 551 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SLC41A3Q96GZ6 507 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ZNF670Q9BS34 389 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 NEUROG2Q9H2A3 272 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 RHBGQ9H310 441 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 PDFQ9HBH1 243 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 RDH14Q9HBH5 336 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 RAB18Q9NP72 206 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 MRPL40Q9NQ50 206 aaKnown RBP3.14□□□□□ -1.91
CNOT4-209ENST00000473470 SLC17A5Q9NRA2 495 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 CLEC4EQ9ULY5 219 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 MOKQ9UQ07 419 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ASB3Q9Y575 518 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 ZANQ9Y493 2812 aa3.14□□□□□ -1.91
CNOT4-209ENST00000473470 IGHV1OR15-1A0A075B7D0 117 aa3.13□□□□□ -1.91
CNOT4-209ENST00000473470 IGHV7-81A0A0B4J1V7 117 aa3.13□□□□□ -1.91
CNOT4-209ENST00000473470 METTL21EPA6NDL7 271 aa3.13□□□□□ -1.91
CNOT4-209ENST00000473470 TLCD2A6NGC4 264 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms