RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 CCL2P13500 99 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 HSD17B1P14061 328 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 SLC25A16P16260 332 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 ZNF14P17017 642 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-222ENST00000473373 NR4A1P22736 598 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 LCN6P62502 163 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 LSM11P83369 360 aaKnown RBP eCLIP9.97□□□□□ -0.81
CPNE1-222ENST00000473373 HGFACQ04756 655 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 GGTLC2Q14390 218 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 THEM4Q5T1C6 240 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 RGS7BPQ6MZT1 257 aaPredicted RBP9.97□□□□□ -0.81
CPNE1-222ENST00000473373 ZNF627Q7L945 461 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 ALDH16A1Q8IZ83 802 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 SNX33Q8WV41 574 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 NSL1Q96IY1 281 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 SORCS2Q96PQ0 1159 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 SEPHS2Q99611 448 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 SYT3Q9BQG1 590 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 TPK1Q9H3S4 243 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 GORASP2Q9H8Y8 452 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 YAE1D1Q9NRH1 226 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 MAN2C1Q9NTJ4 1040 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 B3GNT2Q9NY97 397 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 EIF3KQ9UBQ5 218 aaKnown RBP9.97□□□□□ -0.81
CPNE1-222ENST00000473373 GPR160Q9UJ42 338 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 POLR1DQ9Y2S0 133 aa9.97□□□□□ -0.81
CPNE1-222ENST00000473373 IGHV4-30-2A0A087WSY4 118 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 UNC119BA6NIH7 251 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 NPIPB13A6NJU9 1138 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 NPIPB4C9JG80 1138 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 TPD52L2O43399 206 aaKnown RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 GPRIN2O60269 458 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 FAM107AO95990 144 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 F12P00748 615 aaPredicted RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 ADRA2AP08913 450 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 APEX1P27695 318 aaKnown RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 IFNGR2P38484 337 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 PPOXP50336 477 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 RPS6KA3P51812 740 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 VLDLRP98155 873 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 EFNB3Q15768 340 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 NKPD1Q17RQ9 610 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 SWI5Q1ZZU3 235 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 C10orf128Q5T292 105 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 ARMC4Q5T2S8 1044 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 UNQ6126/PRO20091Q6UXV3 157 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 NHLRC1Q6VVB1 395 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 CYP2R1Q6VVX0 501 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 ZDHHC21Q8IVQ6 265 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 FAM86B1Q8N7N1 296 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 FGFBP3Q8TAT2 258 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 FANK1Q8TC84 345 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 SLC7A13Q8TCU3 470 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 RSRC1Q96IZ7 334 aaKnown RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 LRGUKQ96M69 825 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 TSPAN32Q96QS1 320 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 KCNK17Q96T54 332 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 MRPL13Q9BYD1 178 aaKnown RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 SIAEQ9HAT2 523 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 SMURF2Q9HAU4 748 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 MYOZ1Q9NP98 299 aaPredicted RBP9.96□□□□□ -0.82
CPNE1-222ENST00000473373 NDUFAF4Q9P032 175 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 ABCA1O95477 2261 aa9.96□□□□□ -0.82
CPNE1-222ENST00000473373 TEX13CA0A0J9YWL9 993 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 TRBV4-1A0A0J9YWV2 114 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 A0A1W2PRQ8 180 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 SOCS2O14508 198 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 CDC42EP2O14613 210 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MGRN1O60291 552 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 IGHMP01871 453 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 CD14P08571 375 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 ZNF32P17041 273 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MSR1P21757 451 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 CALB2P22676 271 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 NOS3P29474 1203 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 RRM2P31350 389 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 GLRXP35754 106 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 RAD52P43351 418 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 GDI2P50395 445 aaKnown RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 PCBD1P61457 104 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MRPS34P82930 218 aaKnown RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 KRR1Q13601 381 aaKnown RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 DGCR6Q14129 220 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 HIST3H3Q16695 136 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MST1LQ2TV78 715 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 ALKBH6Q3KRA9 238 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 NRN1LQ496H8 165 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 PABPC1L2AQ5JQF8 200 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 TMPRSS11FQ6ZWK6 438 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 JAZF1Q86VZ6 243 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 CLDN22Q8N7P3 220 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 ARIH2OSQ8N7S6 290 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 NEU4Q8WWR8 484 aaPredicted RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 C11orf40Q8WZ69 217 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MRPL24Q96A35 216 aaKnown RBP9.95□□□□□ -0.82
CPNE1-222ENST00000473373 RASD2Q96D21 266 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 Q96M85 177 aa9.95□□□□□ -0.82
CPNE1-222ENST00000473373 MS4A5Q9H3V2 200 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms