RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 MUC1P15941 1255 aaPredicted RBP3.11□□□□□ -1.91
CLK1-209ENST00000472679 CSNK1A1P48729 337 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 ESRRGP62508 458 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 ACTG2P63267 376 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 MRPS22P82650 360 aaKnown RBP3.11□□□□□ -1.91
CLK1-209ENST00000472679 GINS1Q14691 196 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 SHHQ15465 462 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 TGFBIQ15582 683 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
CLK1-209ENST00000472679 RUFY3Q7L099 469 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 NIPA1Q7RTP0 329 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 HDDC2Q7Z4H3 204 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 OAFQ86UD1 273 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 NBPF5PQ86XG9 351 aaPredicted RBP3.11□□□□□ -1.91
CLK1-209ENST00000472679 ZNF615Q8N8J6 731 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 LKAAEAR1Q8TD35 194 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 ISYNA1Q9NPH2 558 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 ZNF355PQ9NSJ1 428 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 KLHL28Q9NXS3 571 aa3.11□□□□□ -1.91
CLK1-209ENST00000472679 IGHV5-10-1A0A0J9YXX1 117 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 FOXH1O75593 365 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CST1P01037 141 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 ADRA2AP08913 450 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CALM1P0DP23 149 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CALM2P0DP24 149 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CALM3P0DP25 149 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 PSMC3P17980 439 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 ZNF138P52744 262 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 KRTAP10-1P60331 282 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 ECH1Q13011 328 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 MAB21L1Q13394 359 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CLINT1Q14677 625 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 KDELC1Q6UW63 502 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 NTM-AS1Q6ZSK4 140 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 MMAAQ8IVH4 418 aaKnown RBP3.1□□□□□ -1.91
CLK1-209ENST00000472679 EID2Q8N6I1 236 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 RHEBL1Q8TAI7 183 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 DEDD2Q8WXF8 326 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 CREB3L1Q96BA8 519 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 RTBDNQ9BSG5 229 aaPredicted RBP3.1□□□□□ -1.91
CLK1-209ENST00000472679 PISDQ9UG56 409 aa3.1□□□□□ -1.91
CLK1-209ENST00000472679 A0A0U1RQS6 177 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 DYNC1I1O14576 645 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 SRP72O76094 671 aaKnown RBP3.09□□□□□ -1.91
CLK1-209ENST00000472679 RAB3DO95716 219 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 IGHV1-8P0DP01 117 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 MCF2P10911 925 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 NCF2P19878 526 aaPredicted RBP3.09□□□□□ -1.91
CLK1-209ENST00000472679 NPY1RP25929 384 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 CEACAM6P40199 344 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 NAMPTP43490 491 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 YWHAGP61981 247 aaKnown RBP eCLIP3.09□□□□□ -1.91
CLK1-209ENST00000472679 XKR4Q5GH76 650 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 PRAMEF5Q5TYX0 476 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 PRAMEF6Q5VXH4 476 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 ANKRD22Q5VYY1 191 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 FBXW9Q5XUX1 488 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 IGFL1Q6UW32 110 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 Q6ZSR3 168 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 PDIK1LQ8N165 341 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 UBE2J2Q8N2K1 259 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 OR13C2Q8NGS9 318 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 CXorf40AQ8TE69 158 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 PIBF1Q8WXW3 757 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 FBXO32Q969P5 355 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 RBMXL1Q96E39 390 aaKnown RBP3.09□□□□□ -1.91
CLK1-209ENST00000472679 NEURL3Q96EH8 262 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 SLC25A2Q9BXI2 301 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 METTL7AQ9H8H3 244 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 ETNK2Q9NVF9 386 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 LSM7Q9UK45 103 aaKnown RBP3.09□□□□□ -1.91
CLK1-209ENST00000472679 ING4Q9UNL4 249 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 CSDC2Q9Y534 153 aaKnown RBP3.09□□□□□ -1.91
CLK1-209ENST00000472679 GAKO14976 1311 aa3.09□□□□□ -1.91
CLK1-209ENST00000472679 ZNF816-ZNF321PA0A0X1KG74 233 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 BET1O15155 118 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 DPM1O60762 260 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 RP2O75695 350 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 CLIC3O95833 236 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ZNF43P17038 809 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 DDX39BQ13838 428 aaKnown RBP3.08□□□□□ -1.92
CLK1-209ENST00000472679 RGNQ15493 299 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 PTPN20Q4JDL3 420 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ZNF684Q5T5D7 378 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ANKRD26P1Q6NSI1 321 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 WDR86Q86TI4 376 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 UBALD2Q8IYN6 164 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 RNF182Q8N6D2 247 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 NOXO1Q8NFA2 376 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ZNF721Q8TF20 911 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 TM4SF18Q96CE8 201 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ZNF681Q96N22 645 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 CTRCQ99895 268 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 KCNJ16Q9NPI9 418 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ZNRD1Q9P1U0 126 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 ST3GAL6Q9Y274 331 aa3.08□□□□□ -1.92
CLK1-209ENST00000472679 MRPS12O15235 138 aaKnown RBP3.07□□□□□ -1.92
CLK1-209ENST00000472679 HLA-DPB1P04440 258 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 AQP2P41181 271 aa3.07□□□□□ -1.92
CLK1-209ENST00000472679 CCNHP51946 323 aaPredicted RBP3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms