RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 GUSBP08236 651 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MMP12P39900 470 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 P2RX3P56373 397 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TBCEQ15813 527 aaPredicted RBP12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PLPP7Q8NBV4 271 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR5A2Q8NGI9 324 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR6T1Q8NGN1 323 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR52N5Q8NH56 324 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR2T6Q8NHC8 308 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF300Q96RE9 604 aaPredicted RBP12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OSGIN1Q9UJX0 560 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MRPS28Q9Y2Q9 187 aaKnown RBP12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RAP2BP61225 183 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR10J5Q8NHC4 309 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ASB4Q9Y574 426 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DBX1A6NMT0 343 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF814B7Z6K7 855 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DNAJB6O75190 326 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RFPL3O75679 317 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DPPA4Q7L190 304 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.451e-7■■■■□ 22.3
NPHP3-ACAD11-201ENST00000471702 C20orf24Q9BUV8 137 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ISYNA1Q9NPH2 558 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DUOX1Q9NRD9 1551 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC22A23A1A5C7 686 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 AKR7A3O95154 331 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 Q6ZPB1 254 aaPredicted RBP12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RHOUQ7L0Q8 258 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR5K2Q8NHB8 316 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 INSM2Q96T92 566 aaPredicted RBP12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BANF2Q9H503 90 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 WDR76Q9H967 626 aa12.22□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 IGHV3-15A0A0B4J1V0 119 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 THBS1P07996 1170 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC51BQ86UW2 128 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NMNAT3Q96T66 252 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SNRPBP14678 240 aaKnown RBP12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC5A12Q1EHB4 618 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF750Q32MQ0 723 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF626Q68DY1 528 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC30A7Q8NEW0 376 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR1S2Q8NGQ3 325 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZNF331Q9NQX6 463 aaPredicted RBP12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HEATR5AQ86XA9 2040 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LRIT2A6NDA9 550 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 IL2RAP01589 272 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 C21orf33P30042 268 aaPredicted RBP12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MFGE8Q08431 387 aaPredicted RBP12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ALKAL2Q6UX46 152 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BCL7BQ9BQE9 202 aa12.21□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 A0A1B0GTW7 788 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TOX4O94842 621 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRTGQ2VWP7 1150 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 OR5M9Q8NGP3 310 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TIMP4Q99727 224 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRR14Q9BWN1 585 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NOX4Q9NPH5 578 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 IGSF5Q9NSI5 407 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 A0A1B0GVG6 124 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ABCD4O14678 606 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NTF3P20783 257 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DTYMKP23919 212 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ACSM1Q08AH1 577 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 VWA1Q6PCB0 445 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ONECUT1Q9UBC0 465 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C17orf107Q6ZR85 190 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 CPXM2Q8N436 756 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PGAP2Q9UHJ9 254 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ADGRB1O14514 1584 aa12.21□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM82A0PJX8 343 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RAB19A4D1S5 217 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 H0YIV9 168 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SULT1C2O00338 296 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TNFSF15O95150 251 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SNAPINO95295 136 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SULT1A3P0DMM9 295 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SULT1A4P0DMN0 295 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF93P35789 620 aaPredicted RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 UBE2MP61081 183 aaKnown RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NECAP1Q8NC96 275 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ASB17Q8WXJ9 295 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TMEM106AQ96A25 262 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TNFRSF13CQ96RJ3 184 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ARRDC1-AS1Q9H2J1 176 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 IGHEP01854 428 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 DMRTC1Q5HYR2 192 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TBPL2Q6SJ96 375 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SGMS2Q8NHU3 365 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 TRBV4-1A0A0J9YWV2 114 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C5orf49A4QMS7 147 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZNF716A6NP11 495 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 KIAA1324LA8MWY0 1029 aaPredicted RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 PRDX1Q06830 199 aaKnown RBP12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ACKR1Q16570 336 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 RFLNAQ6ZTI6 216 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 ZFAND2BQ8WV99 257 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 C8orf44Q96CB5 159 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SEMG1P04279 462 aa12.2□□□□□ -0.46
NPHP3-ACAD11-201ENST00000471702 SOX18P35713 384 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms