RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 TRPC5OSA6NMA1 111 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 IDSB3KWA1 339 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NPIPA7E9PJI5 369 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 FXYD1O00168 92 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PSMD12O00232 456 aaPredicted RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SLC1A7O00341 560 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 AIM2O14862 343 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TOX3O15405 576 aaPredicted RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SRPX2O60687 465 aaPredicted RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SCN2BO60939 215 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 MYO1DO94832 1006 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SEMA3DO95025 777 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SCELO95171 688 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TGDSO95455 350 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NSA2O95478 260 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 FAM107AO95990 144 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 IGHV3-13P01766 116 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 FHP07954 510 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NPIPA8P0DM63 369 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TROVE2P10155 538 aaKnown RBP eCLIP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 COX6A1P12074 109 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CPMP14384 443 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TCN2P20062 427 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NT5EP21589 574 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PTPN6P29350 595 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 RAB38P57729 211 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 STXBP1P61764 594 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 HBA1P69905 142 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 DCDP81605 110 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 EMX2Q04743 252 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF763Q0D2J5 394 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 RIGQ13278 110 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TRA2AQ13595 282 aaKnown RBP eCLIP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PDE7AQ13946 482 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TRMT12Q53H54 448 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SPIN4Q56A73 249 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 FGD3Q5JSP0 725 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CCNJQ5T5M9 372 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 REP15Q6BDI9 236 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 GDPGP1Q6ZNW5 385 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ABHD13Q7L211 337 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ANKRD37Q7Z713 158 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PRR22Q8IZ63 422 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SPAG16Q8N0X2 631 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ZCCHC7Q8N3Z6 543 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 RNF148Q8N7C7 305 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 GBP7Q8N8V2 638 aaPredicted RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CCDC197Q8NCU1 140 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 OR7G2Q8NG99 324 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 OR5D16Q8NGK9 328 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 RAB8BQ92930 207 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 UBE2E3Q969T4 207 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PPCDCQ96CD2 204 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PPP3R2Q96LZ3 170 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CCT7Q99832 543 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 TBCDQ9BTW9 1192 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CCDC28BQ9BUN5 200 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 DDA1Q9BW61 102 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NUDT9Q9BW91 350 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 DPY30Q9C005 99 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CHRNA10Q9GZZ6 450 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 CLMPQ9H6B4 373 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 REEP4Q9H6H4 257 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 EGLN3Q9H6Z9 239 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 RPF2Q9H7B2 306 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 FANCEQ9HB96 536 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ZNF160Q9HCG1 818 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PFDN4Q9NQP4 134 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PRTFDC1Q9NRG1 225 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 PNO1Q9NRX1 252 aaKnown RBP3.31□□□□□ -1.88
COL9A1-206ENST00000470652 NKIRAS2Q9NYR9 191 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 SLC25A37Q9NYZ2 338 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 VAPAQ9P0L0 249 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 C3orf18Q9UK00 162 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ERVK-19Q9WJR5 959 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 STK38LQ9Y2H1 464 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ARL2BPQ9Y2Y0 163 aa3.31□□□□□ -1.88
COL9A1-206ENST00000470652 ATRXP46100 2492 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 IGKV3D-11A0A0A0MRZ8 115 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 A0A0G2JMM0 328 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 A0A1W2PPB8 328 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 A0A1W2PRS3 328 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 URADA6NGE7 173 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 ARGFXA6NJG6 315 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 CCT8L1PA6NM43 557 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 KIR3DP1A8MWS1 328 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 C17orf105B2RV13 164 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 B4DXG7 233 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 NPIPB9F8W1W9 429 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 G3V3Y1 287 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 H0YIG0 161 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 UBE2CO00762 179 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 SURF4O15260 269 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 BCAS1O75363 584 aaPredicted RBP3.3□□□□□ -1.88
COL9A1-206ENST00000470652 PDE5AO76074 875 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 HPRP00739 348 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 IGKV1D-16P01601 117 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 IFNA16P05015 189 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 HEXBP07686 556 aa3.3□□□□□ -1.88
COL9A1-206ENST00000470652 COX4I1P13073 169 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms