RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 ARMC4Q5T2S8 1044 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 LRRC18Q8N456 261 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 OR51F2Q8NH61 342 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 VIPAS39Q9H9C1 493 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 C20orf141Q9NUB4 165 aa14.94□□□□□ -0.02
COL7A1-208ENST00000470076 A0A0A6YYJ9 748 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 FXYD1O00168 92 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 TNFRSF1BP20333 461 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 CRYBB2P43320 205 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 ERVS71-1P61550 626 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 CCL8P80075 99 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 TEKQ02763 1124 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 PIN1Q13526 163 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-208ENST00000470076 ICA1LQ8NDH6 482 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 TSPAN32Q96QS1 320 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 TMEM120AQ9BXJ8 343 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 METTL17Q9H7H0 456 aaPredicted RBP14.93□□□□□ -0.02
COL7A1-208ENST00000470076 LPAR2Q9HBW0 351 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 CCNB1IP1Q9NPC3 277 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 MED31Q9Y3C7 131 aa14.93□□□□□ -0.02
COL7A1-208ENST00000470076 TRAV20A0A0B4J274 112 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 HTR3EA5X5Y0 456 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 GMNCA6NCL1 334 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 BBIP1A8MTZ0 92 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 CDC14BO60729 498 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 SHOX2O60902 331 aaPredicted RBP14.92□□□□□ -0.02
COL7A1-208ENST00000470076 SLC2A10O95528 541 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 IGHV3-13P01766 116 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 ANPEPP15144 967 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 DRD4P21917 467 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 OR1E2P47887 323 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 TAF11Q15544 211 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 PABPC1L2AQ5JQF8 200 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 SHQ1Q6PI26 577 aaKnown RBP14.92□□□□□ -0.02
COL7A1-208ENST00000470076 UNQ6126/PRO20091Q6UXV3 157 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 CPEB3Q8NE35 698 aaKnown RBP14.92□□□□□ -0.02
COL7A1-208ENST00000470076 OR1J1Q8NGS3 322 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 MOSPD2Q8NHP6 518 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 NMD3Q96D46 503 aaKnown RBP14.92□□□□□ -0.02
COL7A1-208ENST00000470076 ZNF583Q96ND8 569 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 LRRC37BQ96QE4 947 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 TXNIPQ9H3M7 391 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 UGT2A1Q9Y4X1 527 aa14.92□□□□□ -0.02
COL7A1-208ENST00000470076 WNK2Q9Y3S1 2297 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 TENM1Q9UKZ4 2725 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 IGHV1-69-2A0A0G2JMI3 117 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 MRASO14807 208 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 ZNF32P17041 273 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 CCNOP22674 350 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 STOMP27105 288 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 CDAP32320 146 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 CD47Q08722 323 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 LAPTM4AQ15012 233 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 MAPRE2Q15555 327 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 CYBRD1Q53TN4 286 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 MEX3DQ86XN8 651 aaKnown RBP14.91□□□□□ -0.02
COL7A1-208ENST00000470076 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 FNDC8Q8TC99 324 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 C10orf82Q8WW14 230 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 HDAC2Q92769 488 aaKnown RBP14.91□□□□□ -0.02
COL7A1-208ENST00000470076 NABP1Q96AH0 204 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 DECR2Q9NUI1 292 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 EIF3KQ9UBQ5 218 aaKnown RBP14.91□□□□□ -0.02
COL7A1-208ENST00000470076 HIF3AQ9Y2N7 669 aa14.91□□□□□ -0.02
COL7A1-208ENST00000470076 TPD52L2O43399 206 aaKnown RBP14.9□□□□□ -0.02
COL7A1-208ENST00000470076 TROVE2P10155 538 aaKnown RBP eCLIP14.9□□□□□ -0.02
COL7A1-208ENST00000470076 IFNA8P32881 189 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 MVKQ03426 396 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 FMODQ06828 376 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ST3GAL3Q11203 375 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 KLF10Q13118 480 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 SGCAQ16586 387 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ZNF718Q3SXZ3 478 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 LRRC23Q53EV4 343 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ALG10Q5BKT4 473 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 FAM209AQ5JX71 171 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 FAM27BQ5VT28 67 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ACSM5Q6NUN0 579 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 PCYOX1LQ8NBM8 494 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ZFAND2BQ8WV99 257 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 RAB39BQ96DA2 213 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 POM121L2Q96KW2 1035 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ALG12Q9BV10 488 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ZNF665Q9H7R5 613 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 SAP30LQ9HAJ7 183 aa14.9□□□□□ -0.02
COL7A1-208ENST00000470076 ARGLU1Q9NWB6 273 aaPredicted RBP14.9□□□□□ -0.02
COL7A1-208ENST00000470076 IGKV1D-43A0A0B4J1Z2 117 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 FAM220BPB1ANY3 271 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 CLDN25C9JDP6 229 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 PNPP00491 289 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 GCH1P30793 250 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 KDELR2P33947 212 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 GDI2P50395 445 aaKnown RBP14.89□□□□□ -0.03
COL7A1-208ENST00000470076 ZNF81P51508 661 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 GLO1Q04760 184 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 HFEQ30201 348 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 THEM4Q5T1C6 240 aa14.89□□□□□ -0.03
COL7A1-208ENST00000470076 AVPI1Q5T686 147 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms