RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 TREM2Q9NZC2 230 aa11.54□□□□□ -0.56
EFNA1-203ENST00000469878 TMEFF2Q9UIK5 374 aaPredicted RBP11.54□□□□□ -0.56
EFNA1-203ENST00000469878 MED31Q9Y3C7 131 aa11.54□□□□□ -0.56
EFNA1-203ENST00000469878 CACNG2Q9Y698 323 aa11.54□□□□□ -0.56
EFNA1-203ENST00000469878 LOC100509620A0A075B734 347 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 TRAV27A0A087WT01 109 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 C17orf100A8MU93 164 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 FFAR1O14842 300 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 PPIHO43447 177 aaKnown RBP11.53□□□□□ -0.56
EFNA1-203ENST00000469878 SNAP29O95721 258 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 IFI30P13284 250 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 ZNF250P15622 560 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 ACHEP22303 614 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 CCNOP22674 350 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 THBS2P35442 1172 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 MPV17P39210 176 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 DAP3P51398 398 aaKnown RBP11.53□□□□□ -0.56
EFNA1-203ENST00000469878 KLF3P57682 345 aaPredicted RBP11.53□□□□□ -0.56
EFNA1-203ENST00000469878 ERVK-25P63136 954 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 CD47Q08722 323 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 FHL1Q13642 323 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 TBC1D28Q2M2D7 210 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 SLC25A47Q6Q0C1 308 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 LRRC75AQ8NAA5 344 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 AKR7LQ8NHP1 331 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 SYNPRQ8TBG9 265 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 LIPHQ8WWY8 451 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 PRRC1Q96M27 445 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 HINT3Q9NQE9 182 aaKnown RBP11.53□□□□□ -0.56
EFNA1-203ENST00000469878 HIF3AQ9Y2N7 669 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 CAPN7Q9Y6W3 813 aa11.53□□□□□ -0.56
EFNA1-203ENST00000469878 ELOVL7A1L3X0 281 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 H7C1C5 153 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 IGF2P01344 180 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 SCG5P05408 212 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 VIMP08670 466 aaKnown RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 DVL1P1P54792 670 aaPredicted RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 UCP2P55851 309 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 LCN6P62502 163 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 MRPS34P82930 218 aaKnown RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 HSF2Q03933 536 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 MAPRE2Q15555 327 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 SGCAQ16586 387 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 NRN1LQ496H8 165 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 SPRNQ5BIV9 151 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 ALG10Q5BKT4 473 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 OTPQ5XKR4 325 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 RFPL4BQ6ZWI9 263 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 ZNF771Q7L3S4 317 aaPredicted RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 NRMQ8IXM6 262 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 OR1J1Q8NGS3 322 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 OR13C2Q8NGS9 318 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 OR51A7Q8NH64 312 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 BPIFA2Q96DR5 249 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 POLR2J2Q9GZM3 115 aaKnown RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 POLR2J3Q9H1A7 115 aaKnown RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 TXNIPQ9H3M7 391 aa11.52□□□□□ -0.57
EFNA1-203ENST00000469878 ZNF346Q9UL40 294 aaKnown RBP11.52□□□□□ -0.57
EFNA1-203ENST00000469878 IQCMA0A1B0GVH7 501 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 CENPBD1B2RD01 187 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 NME4O00746 187 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 RGS9O75916 674 aaPredicted RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 NPPAP01160 153 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 GAAP10253 952 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 THRBP10828 461 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 ZNF26P17031 533 aaPredicted RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 ITGA2P17301 1181 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 STOMP27105 288 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 LAP3P28838 519 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 APLNRP35414 380 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 SRP14P37108 136 aaKnown RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 CTXN1P60606 82 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 LMO4P61968 165 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 SELENOWP63302 87 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 PSG4Q00888 419 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 MVKQ03426 396 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 PLP2Q04941 152 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 TSTQ16762 297 aaKnown RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 TBPL2Q6SJ96 375 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 TSEN54Q7Z6J9 526 aaKnown RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 SLC15A3Q8IY34 581 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 OFCC1Q8IZS5 231 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 PCYOX1LQ8NBM8 494 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 ZNF519Q8TB69 540 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 IPCEF1Q8WWN9 437 aaPredicted RBP11.51□□□□□ -0.57
EFNA1-203ENST00000469878 POM121L2Q96KW2 1035 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 WNT5BQ9H1J7 359 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 C1orf198Q9H425 327 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 SIAEQ9HAT2 523 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 CCNB1IP1Q9NPC3 277 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 HIF1ANQ9NWT6 349 aa11.51□□□□□ -0.57
EFNA1-203ENST00000469878 TANC2Q9HCD6 1990 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 A0A1W2PPL8 197 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 SLC22A23A1A5C7 686 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 C5orf49A4QMS7 147 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 ZSCAN5BA6NJL1 495 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 NPIPB13A6NJU9 1138 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 B4DSR2 109 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 NPIPB4C9JG80 1138 aa11.5□□□□□ -0.57
EFNA1-203ENST00000469878 CDC42EP2O14613 210 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms