RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ZNF823P16415 610 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 GALP22466 123 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 EGR3Q06889 387 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 TRAM1Q15629 374 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 RSPO4Q2I0M5 234 aaPredicted RBP16.15■□□□□ 0.18
SMC4-211ENST00000469858 CCDC58Q4VC31 144 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 ZNF766Q5HY98 468 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 LIPNQ5VXI9 398 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 SLC18B1Q6NT16 456 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 CREB3L2Q70SY1 520 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 OR9K2Q8NGE7 335 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 OR13C5Q8NGS8 318 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 ADGRG7Q96K78 797 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 BARHL1Q9BZE3 327 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 NXF2Q9GZY0 626 aaKnown RBP16.15■□□□□ 0.18
SMC4-211ENST00000469858 SLC6A15Q9H2J7 730 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 KCNN2Q9H2S1 579 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 KLK13Q9UKR3 277 aa16.15■□□□□ 0.18
SMC4-211ENST00000469858 SULT1C4O75897 302 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 ABHD16AO95870 558 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 GAAP10253 952 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 TGM4P49221 684 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 RORCP51449 518 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 CLDN15P56746 228 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 DCTN2Q13561 401 aaKnown RBP16.14■□□□□ 0.17
SMC4-211ENST00000469858 EIF2B1Q14232 305 aaKnown RBP16.14■□□□□ 0.17
SMC4-211ENST00000469858 SLC17A1Q14916 467 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 POU4F3Q15319 338 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.14■□□□□ 0.17
SMC4-211ENST00000469858 ABHD4Q8TB40 342 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 HSD17B8Q92506 261 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 ZNF385AQ96PM9 386 aaKnown RBP16.14■□□□□ 0.17
SMC4-211ENST00000469858 KCNS3Q9BQ31 491 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 PDCD1LG2Q9BQ51 273 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 TTYH2Q9BSA4 534 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 SIAEQ9HAT2 523 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 SLCO1C1Q9NYB5 712 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 CSAG2Q9Y5P2 127 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 A3GALT2U3KPV4 340 aa16.14■□□□□ 0.17
SMC4-211ENST00000469858 A0A1W2PPL8 197 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 LINC01387J3KSC0 135 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 CASKO14936 926 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 UPK3AO75631 287 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 GLSO94925 669 aaPredicted RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 NANOS3P60323 173 aaKnown RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 FOXC1Q12948 553 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 LRRN1Q6UXK5 716 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 LINC00299Q6ZSB3 139 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 SPATC1Q76KD6 591 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 GLB1L2Q8IW92 636 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 SLC25A46Q96AG3 418 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 SCMH1Q96GD3 660 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 MED18Q9BUE0 208 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 TLX3O43711 291 aaPredicted RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 PPIAP62937 165 aaKnown RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 HNRNPA0Q13151 305 aaKnown RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 MS4A15Q8N5U1 240 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 TMEM178AQ8NBL3 297 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 ASB17Q8WXJ9 295 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 ROBO4Q8WZ75 1007 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 MCHR2Q969V1 340 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 RNF166Q96A37 237 aaPredicted RBP16.13■□□□□ 0.17
SMC4-211ENST00000469858 OR8B4Q96RC9 309 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 AKIP1Q9NQ31 210 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 KLHL9Q9P2J3 617 aa16.13■□□□□ 0.17
SMC4-211ENST00000469858 PHF3Q92576 2039 aaKnown RBP16.12■□□□□ 0.17
SMC4-211ENST00000469858 SHISA3A0PJX4 238 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 SPINK2P20155 84 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 TNFSF10P50591 281 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 FAM27D1Q5T7N8 215 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 ASB18Q6ZVZ8 466 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 CEACAM19Q7Z692 300 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 LINC00346Q8IVM7 164 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 ZFP62Q8NB50 900 aaPredicted RBP16.12■□□□□ 0.17
SMC4-211ENST00000469858 C11orf40Q8WZ69 217 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 ZNF845Q96IR2 970 aaPredicted RBP16.12■□□□□ 0.17
SMC4-211ENST00000469858 ABHD6Q9BV23 337 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 MFRPQ9BY79 579 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 ZNF407Q9C0G0 2248 aa16.12■□□□□ 0.17
SMC4-211ENST00000469858 CLDN25C9JDP6 229 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 J3QRK9 145 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 WNT11O96014 354 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 QDPRP09417 244 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 BMP4P12644 408 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 LAP3P28838 519 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 LHX2P50458 406 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 SRYQ05066 204 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 HIST3H3Q16695 136 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 ZNF829Q3KNS6 432 aaPredicted RBP16.11■□□□□ 0.17
SMC4-211ENST00000469858 ACSM3Q53FZ2 586 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 TRILQ7L0X0 811 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 SLC22A16Q86VW1 577 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 ZNF454Q8N9F8 522 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 OR10H5Q8NGA6 315 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 FNDC8Q8TC99 324 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 RPS4Y2Q8TD47 263 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 S100ZQ8WXG8 99 aa16.11■□□□□ 0.17
SMC4-211ENST00000469858 OR2M2Q96R28 347 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms