RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CLDN22Q8N7P3 220 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 NSMAFQ92636 917 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 TAF15Q92804 592 aaKnown RBP eCLIP10.41□□□□□ -0.74
HDAC3-204ENST00000469207 CGREF1Q99674 301 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF426Q9BUY5 554 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 BCL2L14Q9BZR8 327 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 C7orf69Q9H7B7 122 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 C20orf141Q9NUB4 165 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 NKIRAS2Q9NYR9 191 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 UBAP1Q9NZ09 502 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 OPN4Q9UHM6 478 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 CORO2BQ9UQ03 480 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 PPIAL4AQ9Y536 164 aa10.41□□□□□ -0.74
HDAC3-204ENST00000469207 TRRAPQ9Y4A5 3859 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 A0A0G2JMP0 313 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 A0A0X1KG70 313 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 IQCMA0A1B0GVH7 501 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 ZSCAN5BA6NJL1 495 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 CLDN25C9JDP6 229 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 NGFP01138 241 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 ACADSP16219 412 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 STOMP27105 288 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 APLNRP35414 380 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 MMP15P51511 669 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 ZNF84P51523 738 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 ERVK-25P63136 954 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 HSF2Q03933 536 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 SGCAQ16586 387 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 HFEQ30201 348 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 PCGF3Q3KNV8 242 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 AWAT1Q58HT5 328 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 NANOGNBQ7Z5D8 188 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 C1QL2Q7Z5L3 287 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 DHDDSQ86SQ9 333 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 OR4M2Q8NGB6 313 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 OR1J2Q8NGS2 313 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 OR10A6Q8NH74 314 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 SLC25A40Q8TBP6 338 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 LRRC8CQ8TDW0 803 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 TMEM255BQ8WV15 326 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 IPCEF1Q8WWN9 437 aaPredicted RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 GEMIN6Q8WXD5 167 aaKnown RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 ASB10Q8WXI3 467 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 HDAC2Q92769 488 aaKnown RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 NABP1Q96AH0 204 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 MARS2Q96GW9 593 aaKnown RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 POM121L2Q96KW2 1035 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 DUX5Q96PT3 197 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 DCLRE1CQ96SD1 692 aaKnown RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 OR2J1Q9GZK6 312 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 KAT8Q9H7Z6 458 aaKnown RBP10.4□□□□□ -0.74
HDAC3-204ENST00000469207 NANOGQ9H9S0 305 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 SAP30LQ9HAJ7 183 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 MMP26Q9NRE1 261 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 GPR160Q9UJ42 338 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 SH3GLB1Q9Y371 365 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 NDUFAF1Q9Y375 327 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 UGT2A1Q9Y4X1 527 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 PCDHGB1Q9Y5G3 927 aa10.4□□□□□ -0.74
HDAC3-204ENST00000469207 A0A1W2PRG6 482 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 ISPDA4D126 451 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 C5orf49A4QMS7 147 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 MCIDASD6RGH6 385 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 UBOX5O94941 541 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 PTHP01270 115 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 MT-ND1P03886 318 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 GZMMP51124 257 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 PSG4Q00888 419 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 TEKQ02763 1124 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 PIN1Q13526 163 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-204ENST00000469207 BEND6Q5SZJ8 279 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-204ENST00000469207 ARMC4Q5T2S8 1044 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 NOXO1Q8NFA2 376 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 NANPQ8TBE9 248 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 SLC26A7Q8TE54 656 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 RAB1CQ92928 201 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 NMD3Q96D46 503 aaKnown RBP10.39□□□□□ -0.75
HDAC3-204ENST00000469207 RAB39BQ96DA2 213 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 SEPHS2Q99611 448 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 GAL3ST1Q99999 423 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 LRMDAQ9H2I8 198 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 EVA1AQ9H8M9 152 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 SIAEQ9HAT2 523 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 MSL2Q9HCI7 577 aa10.39□□□□□ -0.75
HDAC3-204ENST00000469207 LEF1Q9UJU2 399 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-204ENST00000469207 SOX21Q9Y651 276 aaPredicted RBP10.39□□□□□ -0.75
HDAC3-204ENST00000469207 TRAPPC2LH3BP13 241 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 PIP5K1CO60331 668 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 OR7A10O76100 309 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 PRSS23O95084 383 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SCG5P05408 212 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 LAP3P28838 519 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 GCH1P30793 250 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 OR1E2P47887 323 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 ATP4BP51164 291 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SEC61A1P61619 476 aaKnown RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 UBA52P62987 128 aaKnown RBP10.38□□□□□ -0.75
HDAC3-204ENST00000469207 SCGB2A2Q13296 93 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF718Q3SXZ3 478 aa10.38□□□□□ -0.75
HDAC3-204ENST00000469207 C10orf128Q5T292 105 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms