RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 ACPTQ9BZG2 426 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SLC35B3Q9H1N7 401 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 CDT1Q9H211 546 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SRMSQ9H3Y6 488 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 KIR3DX1Q9H7L2 352 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MYNNQ9NPC7 610 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 KCNJ16Q9NPI9 418 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 NRIP3Q9NQ35 241 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 FAM212BQ9NTI7 297 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 LYRM2Q9NU23 88 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PIGVQ9NUD9 493 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM184CQ9NVA4 438 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 HAO2Q9NYQ3 351 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SPG21Q9NZD8 308 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 OR5AC2Q9NZP5 309 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MYOTQ9UBF9 498 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MTFP1Q9UDX5 166 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SHPKQ9UHJ6 478 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 GNG8Q9UK08 70 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 C19orf53Q9UNZ5 99 aaPredicted RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 ZFP30Q9Y2G7 519 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 MEMO1Q9Y316 297 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 STRAPQ9Y3F4 350 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 PCDHGA1Q9Y5H4 931 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 SLCO1B1Q9Y6L6 691 aa4.42□□□□□ -1.7
SF3B1-207ENST00000468925 YLPM1P49750 1951 aaKnown RBP4.42□□□□□ -1.7
SF3B1-207ENST00000468925 A0A087WZY1 265 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TRAV14DV4A0A0A6YYC5 116 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 A0A0U1RQV5 110 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 A0A1B0GTL3 188 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SLC5A10A0PJK1 596 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 C20orf202A1L168 122 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MGAT4DA6NG13 374 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CBY3A6NI87 242 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CD8B2A6NJW9 211 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DRGXA6NNA5 263 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF726A6NNF4 738 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 J3QRE1 110 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SULT2B1O00204 365 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 BHLHE40O14503 412 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 GAPDHSO14556 408 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZNF208O43345 1280 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 XRCC3O43542 346 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 GLCEO94923 617 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CPSF4O95639 269 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CXCL14O95715 111 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 APODP05090 189 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ADRA2AP08913 450 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FAM157CP0CG43 387 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CXCL8P10145 99 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 LYL1P12980 280 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TBPP20226 339 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FCARP24071 287 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TACR1P25103 407 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 NFYBP25208 207 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PSMB6P28072 239 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TEAD1P28347 426 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CD34P28906 385 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 MPIP34949 423 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 AHRP35869 848 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CD200P41217 278 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RPS10P46783 165 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 OR3A1P47881 315 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 DHPSP49366 369 aaPredicted RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FHITP49789 147 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 AGTR2P50052 363 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 NDUFA6P56556 154 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CLDN12P56749 244 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FAM3AP98173 230 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 HGFACQ04756 655 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ACSM2AQ08AH3 577 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ADIGQ0VDE8 80 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PRDX4Q13162 271 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SKP2Q13309 424 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 NFATC2Q13469 925 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CLINT1Q14677 625 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TAF13Q15543 124 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 RAB11BQ15907 218 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ZBTB6Q15916 424 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SCGB2B2Q4G0G5 96 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ACSM3Q53FZ2 586 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 AKIRIN2Q53H80 203 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ACTBL2Q562R1 376 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 AWAT1Q58HT5 328 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 COA6Q5JTJ3 125 aaKnown RBP4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SIRPB2Q5JXA9 342 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FBXW9Q5XUX1 488 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 GGNBP1Q5YKI7 109 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 FRG2Q64ET8 278 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 ACSM2BQ68CK6 577 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 LEMD1Q68G75 181 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 CNKSR3Q6P9H4 555 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PAQR6Q6TCH4 344 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 KLHL24Q6TFL4 600 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 TMEM205Q6UW68 189 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 LCTLQ6UWM7 567 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 BTNL8Q6UX41 500 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 GDPD4Q6W3E5 623 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 SSX7Q7RTT5 188 aa4.41□□□□□ -1.7
SF3B1-207ENST00000468925 PLPPR4Q7Z2D5 763 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms