RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 DMKNQ6E0U4 476 aaPredicted RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 RPL22L1Q6P5R6 122 aaKnown RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 EGFL6Q8IUX8 553 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 TBC1D15Q8TC07 691 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 ASB17Q8WXJ9 295 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 KCTD7Q96MP8 289 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 ZNF385AQ96PM9 386 aaKnown RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 TTYH2Q9BSA4 534 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 DEFB127Q9H1M4 99 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 EXO5Q9H790 373 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 MRM2Q9UI43 246 aaKnown RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 A0A1W2PPL8 197 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 GABRPO00591 440 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 OGG1O15527 345 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 SULT1C4O75897 302 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 RGS9O75916 674 aaPredicted RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 ITGB2P05107 769 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 QDPRP09417 244 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 GAAP10253 952 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 PSKH1P11801 424 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 ZNF708P17019 499 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 FGF9P31371 208 aaPredicted RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 CLDN18P56856 261 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 EIF2B1Q14232 305 aaKnown RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 TRAM1Q15629 374 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 CCDC58Q4VC31 144 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 ZNF454Q8N9F8 522 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 OR6N1Q8NGY5 312 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 MCHR2Q969V1 340 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 ZNF845Q96IR2 970 aaPredicted RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 OR2M2Q96R28 347 aa16.87■□□□□ 0.29
SMC4-209ENST00000468653 SMAD5Q99717 465 aaKnown RBP16.87■□□□□ 0.29
SMC4-209ENST00000468653 SPTBN2O15020 2390 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 TRBV2A0A0J9YWF9 115 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CD8B2A6NJW9 211 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 HRGP04196 525 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CD8BP10966 210 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 GALP22466 123 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 LAP3P28838 519 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 SOX6P35712 828 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CSNK1A1P48729 337 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CDK5R1Q15078 307 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 HIST3H3Q16695 136 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 SLC25A47Q6Q0C1 308 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 OR10H5Q8NGA6 315 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 PNPLA2Q96AD5 504 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CDADC1Q9BWV3 514 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 SLIRPQ9GZT3 109 aaKnown RBP16.86■□□□□ 0.29
SMC4-209ENST00000468653 GALNT8Q9NY28 637 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 GLTPQ9NZD2 209 aa16.86■□□□□ 0.29
SMC4-209ENST00000468653 CCDC59Q9P031 241 aaKnown RBP16.86■□□□□ 0.29
SMC4-209ENST00000468653 TMCC2O75069 709 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 RPP14O95059 124 aaKnown RBP16.85■□□□□ 0.29
SMC4-209ENST00000468653 ACTL6AO96019 429 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 GDI2P50395 445 aaKnown RBP16.85■□□□□ 0.29
SMC4-209ENST00000468653 MRPL28Q13084 256 aaKnown RBP16.85■□□□□ 0.29
SMC4-209ENST00000468653 BCL2A1Q16548 175 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 RNFT1Q5M7Z0 435 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 ABLIM2Q6H8Q1 611 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 LRRC69Q6ZNQ3 347 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 FCRLAQ7L513 359 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 ZADH2Q8N4Q0 377 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 ZIC4Q8N9L1 334 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 NEIL3Q8TAT5 605 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 HAVCR2Q8TDQ0 301 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 C11orf40Q8WZ69 217 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 GHSRQ92847 366 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 SMIM19Q96E16 107 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 AMELYQ99218 206 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 SEC61A2Q9H9S3 476 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 SLCO1C1Q9NYB5 712 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 MSRB2Q9Y3D2 182 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 PMF1-BGLAPU3KQ54 211 aa16.85■□□□□ 0.29
SMC4-209ENST00000468653 TRGV5A0A0B4J1U4 118 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 TFECO14948 347 aaPredicted RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 CDRT1O95170 752 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 SYNGR4O95473 234 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 RPS19P39019 145 aaKnown RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 TGM4P49221 684 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 PMP22Q01453 160 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 INSL4Q14641 139 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 TEX30Q5JUR7 227 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 LIPNQ5VXI9 398 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 KCTD18Q6PI47 426 aaPredicted RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 LRFN4Q6PJG9 635 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 MS4A15Q8N5U1 240 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 MCFD2Q8NI22 146 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ZFAND2BQ8WV99 257 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 TMEM54Q969K7 222 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 ZNF775Q96BV0 537 aaPredicted RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 PGLYRP3Q96LB9 341 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 OR8B4Q96RC9 309 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 DCLRE1CQ96SD1 692 aaKnown RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 ABHD6Q9BV23 337 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 KCNN2Q9H2S1 579 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 SIAEQ9HAT2 523 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 SNTG1Q9NSN8 517 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 PAQR5Q9NXK6 330 aaPredicted RBP16.84■□□□□ 0.29
SMC4-209ENST00000468653 WASF3Q9UPY6 502 aa16.84■□□□□ 0.29
SMC4-209ENST00000468653 LIPGQ9Y5X9 500 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms