RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 TAS2R1Q9NYW7 299 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 REV1Q9UBZ9 1251 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 SVEP1Q4LDE5 3571 aa16.43■□□□□ 0.22
COL7A1-207ENST00000467985 PIP5K1CO60331 668 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 GMNNO75496 209 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 STAMBPO95630 424 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 SNAP29O95721 258 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 IGHMP01871 453 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 APEHP13798 732 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF23P17027 643 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 YAP1P46937 504 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 SLC9A3P48764 834 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 SELENOVP59797 346 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 RPL27P61353 136 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 PRKCDQ05655 676 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 TBC1D28Q2M2D7 210 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 OAFQ86UD1 273 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 NRMQ8IXM6 262 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 ZCCHC24Q8N2G6 241 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 RNF148Q8N7C7 305 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 UBASH3BQ8TF42 649 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 ACOT11Q8WXI4 607 aaPredicted RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 HSH2DQ96JZ2 352 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 RBP7Q96R05 134 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 CDH20Q9HBT6 801 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 MAN2C1Q9NTJ4 1040 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 GMPR2Q9P2T1 348 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 ABCD2Q9UBJ2 740 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 LPAR3Q9UBY5 353 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 GPR160Q9UJ42 338 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 PRPF19Q9UMS4 504 aaKnown RBP16.42■□□□□ 0.22
COL7A1-207ENST00000467985 SNX13Q9Y5W8 968 aa16.42■□□□□ 0.22
COL7A1-207ENST00000467985 STAB1Q9NY15 2570 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 IGHV4-61A0A0C4DH41 118 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 EFCAB9A8MZ26 197 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 SERPINA1P01009 418 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 TCN1P20061 433 aaPredicted RBP16.41■□□□□ 0.22
COL7A1-207ENST00000467985 CD47Q08722 323 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 ZSCAN26Q16670 478 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 MSMPQ1L6U9 139 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 THEM4Q5T1C6 240 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 PODNL1Q6PEZ8 512 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF730Q6ZMV8 503 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 ARHGAP24Q8N264 748 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 FAM162AQ96A26 154 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 NMD3Q96D46 503 aaKnown RBP16.41■□□□□ 0.22
COL7A1-207ENST00000467985 SYT3Q9BQG1 590 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 THTPAQ9BU02 230 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 BPESC1Q9GZL8 116 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 ANKRD19PQ9H560 264 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 RHCGQ9UBD6 479 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 RPS6KA6Q9UK32 745 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 CUBNO60494 3623 aa16.41■□□□□ 0.22
COL7A1-207ENST00000467985 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 A6NIZ1 184 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 J3KTA2 159 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 FFAR1O14842 300 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 DNAJC8O75937 253 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 SLC2A10O95528 541 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 IGFBP1P08833 259 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 MMP7P09237 267 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 ZNF16P17020 682 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 MAKP20794 623 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 GUCA1AP43080 201 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 RAD52P43351 418 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 CHN2P52757 468 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 CTXN1P60606 82 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 RAP1BP61224 184 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 RAP1AP62834 184 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 HSF2Q03933 536 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 TOP3AQ13472 1001 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 FAM166AQ6J272 317 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 RGS7BPQ6MZT1 257 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 MBOAT2Q6ZWT7 520 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 RRM2BQ7LG56 351 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 LRRC18Q8N456 261 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 FAM156AQ8NDB6 213 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 HDAC2Q92769 488 aaKnown RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 SLC7A6OSQ96CW6 309 aaPredicted RBP16.4■□□□□ 0.22
COL7A1-207ENST00000467985 BEX2Q9BXY8 128 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 BCL2L14Q9BZR8 327 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 NDEL1Q9GZM8 345 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 CCNB1IP1Q9NPC3 277 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 DUSP13Q9UII6 198 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 UGT2A1Q9Y4X1 527 aa16.4■□□□□ 0.22
COL7A1-207ENST00000467985 LOC100289279A0A1B0GTE1 492 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 A0A1W2PPW3 197 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 LMX1BO60663 402 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 FAM157CP0CG43 387 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 APLNRP35414 380 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 SPATS1Q496A3 300 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 SLC25A47Q6Q0C1 308 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 OR51A7Q8NH64 312 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 ZNF519Q8TB69 540 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 C11orf40Q8WZ69 217 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 HPS1Q92902 700 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 TPK1Q9H3S4 243 aa16.39■□□□□ 0.21
COL7A1-207ENST00000467985 NMNAT1Q9HAN9 279 aaPredicted RBP16.39■□□□□ 0.21
COL7A1-207ENST00000467985 KCNS2Q9ULS6 477 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms