RNA–Protein interactions for RNA: ENST00000467560.5

ATPAF2-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-204ENST00000467560 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 CPLX4Q7Z7G2 160 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 MICU2Q8IYU8 434 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 LRRC75AQ8NAA5 344 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 RBM15BQ8NDT2 890 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 CLDND2Q8NHS1 167 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 NSMAFQ92636 917 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 RDH5Q92781 318 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 POLR2J2Q9GZM3 115 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 POLR2J3Q9H1A7 115 aaKnown RBP12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 SIAEQ9HAT2 523 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 CDH20Q9HBT6 801 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 HIF3AQ9Y2N7 669 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 MED31Q9Y3C7 131 aa12.62□□□□□ -0.39
ATPAF2-204ENST00000467560 LOC100509620A0A075B734 347 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 TRAV27A0A087WT01 109 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 SNAP29O95721 258 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 IFNA14P01570 189 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 LCKP06239 509 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 THRBP10828 461 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 IFI30P13284 250 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF32P17041 273 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 GPR6P46095 362 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF84P51523 738 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 UCP2P55851 309 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 MRPS34P82930 218 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 GLO1Q04760 184 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 MAPRE2Q15555 327 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 TSEN54Q7Z6J9 526 aaKnown RBP12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 NRMQ8IXM6 262 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 SLC15A3Q8IY34 581 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF101Q8IZC7 436 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 AKR7LQ8NHP1 331 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 SYNPRQ8TBG9 265 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 BPIFA2Q96DR5 249 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 PRRC1Q96M27 445 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 C19orf24Q9BVV8 132 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 TXNIPQ9H3M7 391 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 LPAR2Q9HBW0 351 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 TREM2Q9NZC2 230 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 TMEFF2Q9UIK5 374 aaPredicted RBP12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 CACNG2Q9Y698 323 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 CAPN7Q9Y6W3 813 aa12.61□□□□□ -0.39
ATPAF2-204ENST00000467560 ELOVL7A1L3X0 281 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 C17orf100A8MU93 164 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 CENPBD1B2RD01 187 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 SNX3O60493 162 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 CDC14BO60729 498 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 SCG5P05408 212 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF26P17031 533 aaPredicted RBP12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 DRD4P21917 467 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ACHEP22303 614 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ERVK-25P63136 954 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 CCL8P80075 99 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 PSG4Q00888 419 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 LIPEQ05469 1076 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 SGCAQ16586 387 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 NKPD1Q17RQ9 610 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 TBC1D28Q2M2D7 210 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ALG10Q5BKT4 473 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 SPATA46Q5T0L3 261 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 TBPL2Q6SJ96 375 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 DPPA2Q7Z7J5 298 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 PCYOX1LQ8NBM8 494 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ICA1LQ8NDH6 482 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 OR51A7Q8NH64 312 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF519Q8TB69 540 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 POM121L2Q96KW2 1035 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 HINT3Q9NQE9 182 aaKnown RBP12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 GID8Q9NWU2 228 aa12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 ZNF346Q9UL40 294 aaKnown RBP12.6□□□□□ -0.39
ATPAF2-204ENST00000467560 IQCMA0A1B0GVH7 501 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 NPIPB13A6NJU9 1138 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 NPIPB4C9JG80 1138 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 NME4O00746 187 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 PPIHO43447 177 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 CCDC22O60826 627 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 PRSS23O95084 383 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 FAM107AO95990 144 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 SAGP10523 405 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 HNF1AP20823 631 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 CCNOP22674 350 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 STOMP27105 288 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 LAP3P28838 519 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 RBMXP38159 391 aaKnown RBP12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 MPV17P39210 176 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 KLF3P57682 345 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 LMO4P61968 165 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 HSF2Q03933 536 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 CD47Q08722 323 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 ST3GAL3Q11203 375 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 C8orf82Q6P1X6 216 aaPredicted RBP12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 RINLQ6ZS11 566 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 PIGWQ7Z7B1 504 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 TREML1Q86YW5 311 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 OFCC1Q8IZS5 231 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 OR1J1Q8NGS3 322 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 OR13C2Q8NGS9 318 aa12.59□□□□□ -0.39
ATPAF2-204ENST00000467560 WNT5BQ9H1J7 359 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms