RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 SH3GL1Q99961 368 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 KCTD14Q9BQ13 255 aaPredicted RBP1.95□□□□□ -2.1
ATG3-204ENST00000467275 MRPL47Q9HD33 250 aaKnown RBP1.95□□□□□ -2.1
ATG3-204ENST00000467275 ETNK2Q9NVF9 386 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 NMRK1Q9NWW6 199 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 SLC2A8Q9NY64 477 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 SPATA7Q9P0W8 599 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 RABL2BQ9UNT1 228 aa1.95□□□□□ -2.1
ATG3-204ENST00000467275 CARHSP1Q9Y2V2 147 aaKnown RBP1.95□□□□□ -2.1
ATG3-204ENST00000467275 CSDC2Q9Y534 153 aaKnown RBP1.95□□□□□ -2.1
ATG3-204ENST00000467275 IGLV3-12A0A075B6K2 115 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 PEX7O00628 323 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 PSTPIP1O43586 416 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 ZNF43P17038 809 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 TCN1P20061 433 aaPredicted RBP1.94□□□□□ -2.1
ATG3-204ENST00000467275 CASP14P31944 242 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 FGF8P55075 233 aaPredicted RBP1.94□□□□□ -2.1
ATG3-204ENST00000467275 VAX1Q5SQQ9 334 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 CCDC183Q5T5S1 534 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 RNASEKQ6P5S7 137 aaKnown RBP1.94□□□□□ -2.1
ATG3-204ENST00000467275 Q6ZSR3 168 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 NANOGNBQ7Z5D8 188 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 ZADH2Q8N4Q0 377 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 RAB3IL1Q8TBN0 382 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 LRRC58Q96CX6 371 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 RASD2Q96D21 266 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 HSFY1Q96LI6 401 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 CCDC77Q9BR77 488 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 TMEM59Q9BXS4 323 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 UGT1A7Q9HAW7 530 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 UGT1A10Q9HAW8 530 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 UGT1A8Q9HAW9 530 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 TM9SF3Q9HD45 589 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 EXD2Q9NVH0 621 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 KLHL28Q9NXS3 571 aa1.94□□□□□ -2.1
ATG3-204ENST00000467275 IGKV1D-13A0A0B4J2D9 117 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 PLAC8L1A1L4L8 177 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 GOLGA8OA6NCC3 632 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 FAM47DPA6NHR8 397 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 CCDC169A6NNP5 214 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 GOLGA8NF8WBI6 632 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 GOSR2O14653 212 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 SOX15O60248 233 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 MGRN1O60291 552 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 CSF3P09919 207 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 IGHV3-43DP0DP04 118 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 IGKV1-13P0DP09 117 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 HNRNPH3P31942 346 aaKnown RBP1.93□□□□□ -2.1
ATG3-204ENST00000467275 RORAP35398 523 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 ATP5C1P36542 298 aaKnown RBP1.93□□□□□ -2.1
ATG3-204ENST00000467275 SUB1P53999 127 aaKnown RBP eCLIP1.93□□□□□ -2.1
ATG3-204ENST00000467275 PRMT2P55345 433 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 REG3AQ06141 175 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 IDI1Q13907 227 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 FZD2Q14332 565 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 SGCAQ16586 387 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 LCN12Q6JVE5 192 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 TMEM107Q6UX40 140 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 LYPD2Q6UXB3 125 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 LHFPL3Q86UP9 236 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 PUSL1Q8N0Z8 303 aaKnown RBP1.93□□□□□ -2.1
ATG3-204ENST00000467275 CNPY4Q8N129 248 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 MS4A15Q8N5U1 240 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 OR56B2PQ8NGI1 322 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 OR1N2Q8NGR9 330 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 OR2G3Q8NGZ4 309 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 PLPPR1Q8TBJ4 325 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 RGP1Q92546 391 aaPredicted RBP1.93□□□□□ -2.1
ATG3-204ENST00000467275 STMN2Q93045 179 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 PSMC3IPQ9P2W1 217 aaPredicted RBP1.93□□□□□ -2.1
ATG3-204ENST00000467275 STARD10Q9Y365 291 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 MMACHCQ9Y4U1 282 aa1.93□□□□□ -2.1
ATG3-204ENST00000467275 A0A1B0GVI7 797 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 PRSS37A4D1T9 235 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 SRP72O76094 671 aaKnown RBP1.92□□□□□ -2.1
ATG3-204ENST00000467275 ALDOBP05062 364 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 SERPIND1P05546 499 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 GKN3PP0CG01 181 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 CNR1P21554 472 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 ZNF92Q03936 586 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 ARHGAP19Q14CB8 494 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 CNIH2Q6PI25 160 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 TMEM135Q86UB9 458 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 THOC6Q86W42 341 aaKnown RBP1.92□□□□□ -2.1
ATG3-204ENST00000467275 SPATA4Q8NEY3 305 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 OR2G2Q8NGZ5 317 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 ACTRT1Q8TDG2 376 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 CD300LFQ8TDQ1 290 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 SGK3Q96BR1 496 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 DNAJC19Q96DA6 116 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 OR2A5Q96R48 311 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 NUP58Q9BVL2 599 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 ILKAPQ9H0C8 392 aaPredicted RBP1.92□□□□□ -2.1
ATG3-204ENST00000467275 ZNF355PQ9NSJ1 428 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 DCAF16Q9NXF7 216 aa1.92□□□□□ -2.1
ATG3-204ENST00000467275 PACSIN2Q9UNF0 486 aaPredicted RBP1.92□□□□□ -2.1
ATG3-204ENST00000467275 MSH6P52701 1360 aa1.91□□□□□ -2.1
ATG3-204ENST00000467275 NID2Q14112 1375 aa1.91□□□□□ -2.1
ATG3-204ENST00000467275 HEATR9A2RTY3 570 aa1.91□□□□□ -2.1
ATG3-204ENST00000467275 ZNF726A6NNF4 738 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 159 ms