RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 C1orf94Q6P1W5 598 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 UNQ9370/PRO34162Q6UXP9 181 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 VTCN1Q7Z7D3 282 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF429Q86V71 674 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 MMAAQ8IVH4 418 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PIANPQ8IYJ0 282 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 IQCKQ8N0W5 287 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PUSL1Q8N0Z8 303 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PDIK1LQ8N165 341 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PDCL2Q8N4E4 241 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 EID2Q8N6I1 236 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 TMEM252Q8N6L7 170 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OTUD6BQ8N6M0 293 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PQLC3Q8N755 202 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR51S1Q8NGJ8 323 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR1S2Q8NGQ3 325 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR2G2Q8NGZ5 317 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR5B3Q8NH48 314 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RHEBL1Q8TAI7 183 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SLC7A13Q8TCU3 470 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR1E3Q8WZA6 343 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SMARCD2Q92925 531 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 ZNF707Q96C28 371 aaPredicted RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 C8orf44Q96CB5 159 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 FAM210BQ96KR6 192 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 XPO6Q96QU8 1125 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SH3GL1Q99961 368 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PELOQ9BRX2 385 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 FAIM2Q9BWQ8 316 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RACGAP1Q9H0H5 632 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 OR51M1Q9H341 326 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 RGCCQ9H4X1 137 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 UGT1A10Q9HAW8 530 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 LY9Q9HBG7 655 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PLGRKTQ9HBL7 147 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 TMEM165Q9HC07 324 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 LYRM4Q9HD34 91 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 SH2D2AQ9NP31 389 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 FGF20Q9NP95 211 aaPredicted RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 QPCTLQ9NXS2 382 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 MTCH1Q9NZJ7 389 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 PEF1Q9UBV8 284 aaKnown RBP1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 CLN8Q9UBY8 286 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 KIF25Q9UIL4 384 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 BTNL2Q9UIR0 455 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 UGT2A1Q9Y4X1 527 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 USP47Q96K76 1375 aa1.41□□□□□ -2.18
GTF3C3-209ENST00000466862 COL5A1P20908 1838 aaPredicted RBP1.4□□□□□ -2.18
GTF3C3-209ENST00000466862 CNTNAP1P78357 1384 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 A0A096LNJ9 63 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 IGHV3-64DA0A0J9YX35 117 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 A8MUA0 341 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 NDUFAB1O14561 156 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TRDMT1O14717 391 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 BCKDKO14874 412 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 AGPAT2O15120 278 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SPOPO43791 374 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 MGRN1O60291 552 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 HUS1O60921 280 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SNAPINO95295 136 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 FGFR1OPO95684 399 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 IGHV2-5P01817 119 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ALDOBP05062 364 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 S100A9P06702 114 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PLEKP08567 350 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TPM1P09493 284 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 MYL2P10916 166 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ADRB3P13945 408 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PRKACAP17612 351 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 BCKDHBP21953 392 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 LONP1P36776 959 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 NUP62P37198 522 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 GLP1RP43220 463 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 VDAC2P45880 294 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TFPI2P48307 235 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CX3CR1P49238 355 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ARRB1P49407 418 aaPredicted RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 BCAP31P51572 246 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 MNAT1P51948 309 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SUB1P53999 127 aaKnown RBP eCLIP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 DAOAP59103 153 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 GPX6P59796 221 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ACTA2P62736 377 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ACTG2P63267 376 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ACTC1P68032 377 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ACTA1P68133 377 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CSNK1G2P78368 415 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PDIA2Q13087 525 aaKnown RBP1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ARFRP1Q13795 201 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 GGTLC2Q14390 218 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 ITIH4Q14624 930 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CYTH1Q15438 398 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 HSDL1Q3SXM5 330 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 BEX5Q5H9J7 111 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 SOHLH1Q5JUK2 328 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 OR52W1Q6IF63 320 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 TTC23LQ6PF05 361 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 CERS6Q6ZMG9 384 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 PRSS41Q7RTY9 318 aa1.4□□□□□ -2.19
GTF3C3-209ENST00000466862 FAM220AQ7Z4H9 259 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms