RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 GDI2P50395 445 aaKnown RBP15.03■□□□□ -0
COL7A1-206ENST00000466591 GZMMP51124 257 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 UCP2P55851 309 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 TMEM33P57088 247 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 GLO1Q04760 184 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 RUNX1T1Q06455 604 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 MSMPQ1L6U9 139 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 PABPC1L2AQ5JQF8 200 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 ELFN2Q5R3F8 820 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 ARPINQ7Z6K5 226 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 CALHM3Q86XJ0 350 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 MICU2Q8IYU8 434 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 ALDH16A1Q8IZ83 802 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 MOSPD2Q8NHP6 518 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 PRRC1Q96M27 445 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 C19orf24Q9BVV8 132 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 OCEL1Q9H607 264 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 SIAEQ9HAT2 523 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 SAR1AQ9NR31 198 aa15.03■□□□□ -0
COL7A1-206ENST00000466591 YLPM1P49750 1951 aaKnown RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 A0A1W2PPL8 197 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 SNAP29O95721 258 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 CLPTM1O96005 669 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 TFP02787 698 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 COL8A2P25067 703 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 STOMP27105 288 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 CDAP32320 146 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 YAP1P46937 504 aaKnown RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 DVL1P1P54792 670 aaPredicted RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 CCL8P80075 99 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 SRSF2Q01130 221 aaKnown RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 LAPTM4AQ15012 233 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 TAF11Q15544 211 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 TSTQ16762 297 aaKnown RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 KRTAP24-1Q3LI83 254 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 FKBP9P1Q75LS8 142 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 PAQR4Q8N4S7 273 aaPredicted RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 OR51F2Q8NH61 342 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 FNDC8Q8TC99 324 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 BPIFA2Q96DR5 249 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 TIMD4Q96H15 378 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 ZNF583Q96ND8 569 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 TXNIPQ9H3M7 391 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 SMURF2Q9HAU4 748 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 ZNF275Q9NSD4 429 aaPredicted RBP15.02■□□□□ -0
COL7A1-206ENST00000466591 TREM2Q9NZC2 230 aa15.02■□□□□ -0
COL7A1-206ENST00000466591 COL6A5A8TX70 2615 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 C5orf49A4QMS7 147 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 HTR3EA5X5Y0 456 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 C17orf100A8MU93 164 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 FXYD1O00168 92 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 PIP5K1CO60331 668 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 IGF2P01344 180 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 ANPEPP15144 967 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 RPL4P36578 427 aaKnown RBP15.01□□□□□ -0.01
COL7A1-206ENST00000466591 MAGEB1P43366 347 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 CRYBA2P53672 197 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 CTXN1P60606 82 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 PCBD1P61457 104 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 ERVK-25P63136 954 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 SELENOWP63302 87 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 MRPS11P82912 194 aaKnown RBP15.01□□□□□ -0.01
COL7A1-206ENST00000466591 MRPS34P82930 218 aaKnown RBP15.01□□□□□ -0.01
COL7A1-206ENST00000466591 FMODQ06828 376 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF718Q3SXZ3 478 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 C10orf128Q5T292 105 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 ARL9Q6T311 187 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 OAFQ86UD1 273 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 CYP4Z1Q86W10 505 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 RFLNBQ8N5W9 214 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 OR51A7Q8NH64 312 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 CLDND2Q8NHS1 167 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 RCN3Q96D15 328 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 MRPL13Q9BYD1 178 aaKnown RBP15.01□□□□□ -0.01
COL7A1-206ENST00000466591 RHCGQ9UBD6 479 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 METRNQ9UJH8 293 aa15.01□□□□□ -0.01
COL7A1-206ENST00000466591 A6NIZ1 184 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 EFCAB9A8MZ26 197 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 SASH3O75995 380 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 MSMBP08118 114 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 IGFBP1P08833 259 aaPredicted RBP15□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF32P17041 273 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 ARHGDIAP52565 204 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 RAP1BP61224 184 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 RPL27P61353 136 aaKnown RBP15□□□□□ -0.01
COL7A1-206ENST00000466591 ERVS71-1P61550 626 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 RAP1AP62834 184 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 MVKQ03426 396 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 TRAM2Q15035 370 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 HIST3H3Q16695 136 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 HFEQ30201 348 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 SPATA46Q5T0L3 261 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 THEM4Q5T1C6 240 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 FAM205BPQ63HN1 556 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 ZNF730Q6ZMV8 503 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 IGFN1Q86VF2 1251 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 POU5F2Q8N7G0 328 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 CPEB3Q8NE35 698 aaKnown RBP15□□□□□ -0.01
COL7A1-206ENST00000466591 AKR7LQ8NHP1 331 aa15□□□□□ -0.01
COL7A1-206ENST00000466591 HDAC2Q92769 488 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms