RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 A8MV72 311 aaPredicted RBP16.65■□□□□ 0.26
CAPN3-209ENST00000466222 SERPINI2O75830 405 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 ZNF3P17036 446 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 RPL18Q07020 188 aaKnown RBP16.65■□□□□ 0.26
CAPN3-209ENST00000466222 PAMR1Q6UXH9 720 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 CREB3L1Q96BA8 519 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 TEAD3Q99594 435 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 FKRPQ9H9S5 495 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 MALT1Q9UDY8 824 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 HIF3AQ9Y2N7 669 aa16.65■□□□□ 0.26
CAPN3-209ENST00000466222 URB1O60287 2271 aaKnown RBP16.64■□□□□ 0.26
CAPN3-209ENST00000466222 MED19A0JLT2 244 aaPredicted RBP16.64■□□□□ 0.26
CAPN3-209ENST00000466222 C11orf98E9PRG8 122 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 KLRC4-KLRK1H3BQV0 150 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 IMPA2O14732 288 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 GLSO94925 669 aaPredicted RBP16.64■□□□□ 0.26
CAPN3-209ENST00000466222 NDUFB2O95178 105 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 IFNGP01579 166 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 SBK2P0C263 348 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 ELK1P19419 428 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 SLC2A5P22732 501 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 UQCRC1P31930 480 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 RPL4P36578 427 aaKnown RBP16.64■□□□□ 0.26
CAPN3-209ENST00000466222 BTG1P62324 171 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 ERVK-25P63136 954 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 IDNKQ5T6J7 187 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 ARHGAP11AQ6P4F7 1023 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 NANOGNBQ7Z5D8 188 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 GHDCQ8N2G8 530 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 MS4A15Q8N5U1 240 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 OR10H4Q8NGA5 316 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 PIGQQ9BRB3 760 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 TMEM246Q9BRR3 403 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 MARCH7Q9H992 704 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 RPRD1BQ9NQG5 326 aaKnown RBP16.64■□□□□ 0.26
CAPN3-209ENST00000466222 IER3IP1Q9Y5U9 82 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 ALG5Q9Y673 324 aa16.64■□□□□ 0.26
CAPN3-209ENST00000466222 LIPT2A6NK58 231 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF814B7Z6K7 855 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 AKR7A3O95154 331 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ITGB2P05107 769 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 AHCYP23526 432 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 SLC6A6P31641 620 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 PPIAP62937 165 aaKnown RBP16.64■□□□□ 0.25
CAPN3-209ENST00000466222 KLHL12Q53G59 568 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ALG10Q5BKT4 473 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 LRRC75AQ8NAA5 344 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ZFP62Q8NB50 900 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-209ENST00000466222 PTP4A1Q93096 173 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ERMAPQ96PL5 475 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-209ENST00000466222 MFRPQ9BY79 579 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 SLC6A15Q9H2J7 730 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 MED20Q9H944 212 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 PAQR5Q9NXK6 330 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-209ENST00000466222 ING3Q9NXR8 418 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 NOX1Q9Y5S8 564 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 SIRT4Q9Y6E7 314 aaPredicted RBP16.64■□□□□ 0.25
CAPN3-209ENST00000466222 MED12Q93074 2177 aa16.64■□□□□ 0.25
CAPN3-209ENST00000466222 PLGP00747 810 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-209ENST00000466222 SERPINA3P01011 423 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 HIST1H2ABP04908 130 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 HLA-DOBP13765 273 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 NPR2P20594 1047 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 RPS7P62081 194 aaKnown RBP16.63■□□□□ 0.25
CAPN3-209ENST00000466222 YIF1BQ5BJH7 314 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 HIST3H2AQ7L7L0 130 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 VASH1Q7L8A9 365 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-209ENST00000466222 MAMDC2Q7Z304 686 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-209ENST00000466222 OR5J2Q8NH18 312 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 HIST1H2ACQ93077 130 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 TRIM63Q969Q1 353 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 SFXN2Q96NB2 322 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 GON7Q9BXV9 100 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 TSPAN10Q9H1Z9 355 aaPredicted RBP16.63■□□□□ 0.25
CAPN3-209ENST00000466222 EML6Q6ZMW3 1958 aa16.63■□□□□ 0.25
CAPN3-209ENST00000466222 OR2T1O43869 369 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 RAMP1O60894 148 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 SC5DO75845 299 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 MT-ATP6P00846 226 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 C1QBP02746 253 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 DIO1P49895 249 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 SUCLG1P53597 346 aaKnown RBP16.62■□□□□ 0.25
CAPN3-209ENST00000466222 GFRA1P56159 465 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 INSL4Q14641 139 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 TBR1Q16650 682 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ZNF57Q68EA5 555 aaPredicted RBP16.62■□□□□ 0.25
CAPN3-209ENST00000466222 PXKQ7Z7A4 578 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 UBE2J2Q8N2K1 259 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 CYB561A3Q8NBI2 242 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 TMEM178AQ8NBL3 297 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 MFSD8Q8NHS3 518 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 RFT1Q96AA3 541 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ABHD17AQ96GS6 310 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 FYTTD1Q96QD9 318 aaKnown RBP16.62■□□□□ 0.25
CAPN3-209ENST00000466222 HCAR1Q9BXC0 346 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 POTEKPQ9BYX7 375 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 DEFB127Q9H1M4 99 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 ADGRL4Q9HBW9 690 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 NLKQ9UBE8 527 aa16.62■□□□□ 0.25
CAPN3-209ENST00000466222 LIPGQ9Y5X9 500 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms