RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 GTPBP8Q8N3Z3 284 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 OR4M2Q8NGB6 313 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 OR1J4Q8NGS1 313 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 MAP6Q96JE9 813 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 JSRP1Q96MG2 331 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 KCNK17Q96T54 332 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 C11orf54Q9H0W9 315 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 CYSLTR2Q9NS75 346 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 A0A087WZY1 265 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 NOTOA8MTQ0 251 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SEC14L5O43304 696 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SERPINA7P05543 415 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 EPXP11678 715 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 TALDO1P37837 337 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 FMODQ06828 376 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 EGR3Q06889 387 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 NDUFA5Q16718 116 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 TMEM176BQ3YBM2 270 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 TIGD3Q6B0B8 471 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 C19orf18Q8NEA5 215 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 IL17RDQ8NFM7 739 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 OR4M1Q8NGD0 313 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 OR5AK2Q8NH90 309 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SLC25A43Q8WUT9 341 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 NSMAFQ92636 917 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SGCZQ96LD1 299 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 SLC22A4Q9H015 551 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 CLEC4AQ9UMR7 237 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 COA3Q9Y2R0 106 aaPredicted RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 MRPS18BQ9Y676 258 aaKnown RBP16.34■□□□□ 0.21
COL9A3-205ENST00000466192 KIAA1549Q9HCM3 1950 aa16.34■□□□□ 0.21
COL9A3-205ENST00000466192 ZNF814B7Z6K7 855 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 PLA2G10O15496 165 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 PTBP1P26599 531 aaKnown RBP eCLIP16.33■□□□□ 0.2
COL9A3-205ENST00000466192 CRABP1P29762 137 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 OR2B6P58173 313 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 MEP1BQ16820 701 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 ACER2Q5QJU3 275 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 SLC7A5P1Q8MH63 180 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 OR5H6Q8NGV6 325 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 PSMF1Q92530 271 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 GPR87Q9BY21 358 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 SLC25A18Q9H1K4 315 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 SLCO1C1Q9NYB5 712 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 A0A0G2JMM0 328 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 A0A1W2PPB8 328 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 A0A1W2PRS3 328 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 KIR3DP1A8MWS1 328 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 ZIC3O60481 467 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 TNFSF15O95150 251 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 SPARCP09486 303 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 SNRPBP14678 240 aaKnown RBP16.33■□□□□ 0.2
COL9A3-205ENST00000466192 BLVRAP53004 296 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 DSCR4P56555 118 aaPredicted RBP16.33■□□□□ 0.2
COL9A3-205ENST00000466192 ADAM8P78325 824 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 RIN1Q13671 783 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 CSRP2Q16527 193 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 TRILQ7L0X0 811 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 PIP4P1Q86T03 277 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 EMC6Q9BV81 110 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 BRD7Q9NPI1 651 aa16.33■□□□□ 0.2
COL9A3-205ENST00000466192 IGKV1D-43A0A0B4J1Z2 117 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 LOC101059948A0A1B0GTJ6 334 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 C21orf140B9A014 251 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 TFECO14948 347 aaPredicted RBP16.32■□□□□ 0.2
COL9A3-205ENST00000466192 MPZL1O95297 269 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 NPR2P20594 1047 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 BIDP55957 195 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 ODF4Q2M2E3 257 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 LRRN1Q6UXK5 716 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 ADPRHL1Q8NDY3 354 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 OR2G2Q8NGZ5 317 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 PHYHIPQ92561 330 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 TMEM41AQ96HV5 264 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 DERL3Q96Q80 235 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 MMP28Q9H239 520 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 HDGFL3Q9Y3E1 203 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
COL9A3-205ENST00000466192 H3BSH0 61 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 PHYHO14832 338 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 KLK2P20151 261 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 DNASE1L1P49184 302 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 GLO1Q04760 184 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 FAM205BPQ63HN1 556 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 ZNF227Q86WZ6 799 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 RDH10Q8IZV5 341 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 RAD1O60671 282 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 RAMP1O60894 148 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 HLA-DQB1P01920 261 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 FKBP2P26885 142 aaKnown RBP16.31■□□□□ 0.2
COL9A3-205ENST00000466192 PTGS2P35354 604 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 SOX2P48431 317 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 TPTEP56180 551 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 MRPL28Q13084 256 aaKnown RBP16.31■□□□□ 0.2
COL9A3-205ENST00000466192 RAET1LQ5VY80 246 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 BEST3Q8N1M1 668 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 ZNF433Q8N7K0 673 aaPredicted RBP16.31■□□□□ 0.2
COL9A3-205ENST00000466192 HAVCR2Q8TDQ0 301 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 MIB2Q96AX9 1013 aa16.31■□□□□ 0.2
COL9A3-205ENST00000466192 ZCCHC4Q9H5U6 513 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms