RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 ADAM18Q9Y3Q7 739 aa12.32□□□□□ -0.44
HDAC6-215ENST00000465457 C12orf71A8MTZ7 269 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 H7C1Q1 480 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 GMFGO60234 142 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 MT-ND5P03915 603 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 IDUAP35475 653 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 SOX6P35712 828 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 DIO1P49895 249 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ERVK-25P63136 954 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ZP4Q12836 540 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 FOXF1Q12946 379 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 DCTN2Q13561 401 aaKnown RBP12.31□□□□□ -0.44
HDAC6-215ENST00000465457 KRR1Q13601 381 aaKnown RBP12.31□□□□□ -0.44
HDAC6-215ENST00000465457 TRAM1Q15629 374 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 POMZP3Q6PJE2 187 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF322Q6U7Q0 402 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-215ENST00000465457 IGFN1Q86VF2 1251 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 NPEPL1Q8NDH3 523 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ADPRHL1Q8NDY3 354 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 OR10H4Q8NGA5 316 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 OR2T4Q8NH00 348 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 NDNFQ8TB73 568 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 TBC1D15Q8TC07 691 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 S100ZQ8WXG8 99 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 RPL3LQ92901 407 aaKnown RBP12.31□□□□□ -0.44
HDAC6-215ENST00000465457 C1GALT1C1Q96EU7 318 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 CHCHD6Q9BRQ6 235 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ALG8Q9BVK2 526 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 HCAR1Q9BXC0 346 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 MED20Q9H944 212 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 ALKBH4Q9NXW9 302 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 MED11Q9P086 117 aa12.31□□□□□ -0.44
HDAC6-215ENST00000465457 HEATR5AQ86XA9 2040 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 LOC100506127A0A0U1RQW1 187 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 A0A1W2PRG6 482 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 A6NIZ1 184 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 FTCDNL1E5RQL4 147 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 G3V3Y1 287 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 XKRYO14609 159 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SMAD7O15105 426 aaKnown RBP12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SEC14L5O43304 696 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 GLCEO94923 617 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 APOL3O95236 402 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 CELA3AP09093 270 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 GAAP10253 952 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SPI1P17947 270 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 NR4A1P22736 598 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 GRPRP30550 384 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 RAP1BP61224 184 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 LSM3P62310 102 aaKnown RBP12.3□□□□□ -0.44
HDAC6-215ENST00000465457 RAP1AP62834 184 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 NKX6-1P78426 367 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SELENBP1Q13228 472 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SLC22A10Q63ZE4 541 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 LEG1Q6P5S2 330 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 PAQR6Q6TCH4 344 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SHFQ7M4L6 423 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 LHFPL3Q86UP9 236 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 PLCZ1Q86YW0 608 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 CROCCP3Q8IVE0 287 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SYS1Q8N2H4 156 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SMPDL3BQ92485 455 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF524Q96C55 264 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 NTNG2Q96CW9 530 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 TMEM41AQ96HV5 264 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 NMNAT3Q96T66 252 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 DDOQ99489 341 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 KLHDC3Q9BQ90 382 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 OR51E2Q9H255 320 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 MMP27Q9H306 513 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 TXNIPQ9H3M7 391 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 SH2D2AQ9NP31 389 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 PALMDQ9NP74 551 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 FANCFQ9NPI8 374 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 BABAM2Q9NXR7 383 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 B3GALT5Q9Y2C3 310 aa12.3□□□□□ -0.44
HDAC6-215ENST00000465457 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF670-ZNF695F2Z2N8 137 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 KLRC4-KLRK1H3BQV0 150 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 PLPP3O14495 311 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 SNPHO15079 494 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 RNF13O43567 381 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 ZNF17P17021 662 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 DAP3P51398 398 aaKnown RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 RPL27P61353 136 aaKnown RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 POU4F3Q15319 338 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 Q5PR19 223 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 OR2G6Q5TZ20 316 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 LIPKQ5VXJ0 399 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 IL20RBQ6UXL0 311 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 H1FNTQ75WM6 255 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 HDDC2Q7Z4H3 204 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 CXorf67Q86X51 503 aaPredicted RBP12.29□□□□□ -0.44
HDAC6-215ENST00000465457 ARIH2OSQ8N7S6 290 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 NAXEQ8NCW5 288 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 GATAD2BQ8WXI9 593 aa12.29□□□□□ -0.44
HDAC6-215ENST00000465457 SLC25A36Q96CQ1 311 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms