RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LRRC36Q1X8D7 754 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 TSPO2Q5TGU0 170 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 P2RY8Q86VZ1 359 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 CCDC36Q8IYA8 594 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 C1orf162Q8NEQ5 155 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-209ENST00000465132 TMEM54Q969K7 222 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 Q96M85 177 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 Q96MF0 132 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 KCNK17Q96T54 332 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 MRPL13Q9BYD1 178 aaKnown RBP15.32■□□□□ 0.04
CPSF4-209ENST00000465132 PLA2G12AQ9BZM1 189 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 CMC2Q9NRP2 79 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 SLC7A10Q9NS82 523 aa15.32■□□□□ 0.04
CPSF4-209ENST00000465132 TMEFF2Q9UIK5 374 aaPredicted RBP15.32■□□□□ 0.04
CPSF4-209ENST00000465132 FN1P02751 2386 aaKnown RBP15.32■□□□□ 0.04
CPSF4-209ENST00000465132 CIB4A0PJX0 185 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 FARS2O95363 451 aaKnown RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 TP53P04637 393 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 HOXB1P14653 301 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 ZNF26P17031 533 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 IL32P24001 234 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 LOXP28300 417 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 HSPA13P48723 471 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 ROR2Q01974 943 aaKnown RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 HIST3H3Q16695 136 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 NRN1LQ496H8 165 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 TTC23Q5W5X9 447 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 LPCAT4Q643R3 524 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 C20orf204Q6ZNR8 217 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 C22orf34Q6ZV56 151 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 DPPA2Q7Z7J5 298 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 DEPDC4Q8N2C3 294 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 C17orf78Q8N4C9 275 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 TRUB1Q8WWH5 349 aaKnown RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 KISS1RQ969F8 398 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 ZC3HAV1LQ96H79 300 aaKnown RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 HS3ST6Q96QI5 342 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 CRLF2Q9HC73 371 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 GPR35Q9HC97 309 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 IMPAD1Q9NX62 359 aa15.31■□□□□ 0.04
CPSF4-209ENST00000465132 VSX1Q9NZR4 365 aaPredicted RBP15.31■□□□□ 0.04
CPSF4-209ENST00000465132 ZAR1LA6NP61 321 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 DHHO43323 396 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 MPZL2O60487 215 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 QDPRP09417 244 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 HIST1H1CP16403 213 aaKnown RBP15.3■□□□□ 0.04
CPSF4-209ENST00000465132 NPR2P20594 1047 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 PSMB1P20618 241 aaKnown RBP15.3■□□□□ 0.04
CPSF4-209ENST00000465132 PEX2P28328 305 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 LGALS3BPQ08380 585 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 SNAPC1Q16533 368 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 SFRP5Q5T4F7 317 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 SLX4IPQ5VYV7 408 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 LEG1Q6P5S2 330 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 KLHL24Q6TFL4 600 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 GABRG1Q8N1C3 465 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 GALNT4Q8N4A0 578 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 SYT14Q8NB59 555 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 OR52E2Q8NGJ4 325 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 OR8D4Q8NGM9 314 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 OR2T4Q8NH00 348 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 RASD2Q96D21 266 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 PERPQ96FX8 193 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 APOL4Q9BPW4 351 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 KCNN2Q9H2S1 579 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 FN3KQ9H479 309 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 OBP2BQ9NPH6 170 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 NKX1-2Q9UD57 310 aaPredicted RBP15.3■□□□□ 0.04
CPSF4-209ENST00000465132 PRSS50Q9UI38 385 aa15.3■□□□□ 0.04
CPSF4-209ENST00000465132 SLC22A23A1A5C7 686 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 SNTNA6NMZ2 147 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ZNF99A8MXY4 864 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 PRR23D1E9PI22 279 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 MITFO75030 526 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 KHDRBS3O75525 346 aaKnown RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 UPK3AO75631 287 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 IGHV3-9P01782 118 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 PRR23D2P0DMB1 279 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 COX5AP20674 150 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ZNF133P52736 654 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 GLO1Q04760 184 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 MESTQ5EB52 335 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 SLC35F1Q5T1Q4 408 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 C10orf128Q5T292 105 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ANKRD34AQ69YU3 496 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ANKRD16Q6P6B7 361 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 OR4K13Q8NH42 304 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 NANOS1Q8WY41 292 aaKnown RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 HDAC2Q92769 488 aaKnown RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 MCHR2Q969V1 340 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 HRASLS5Q96KN8 279 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ALKBH3Q96Q83 286 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 SLC29A1Q99808 456 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 WACQ9BTA9 647 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 GRIP2Q9C0E4 1043 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 H2AFY2Q9P0M6 372 aaPredicted RBP15.29■□□□□ 0.04
CPSF4-209ENST00000465132 FKBP7Q9Y680 259 aa15.29■□□□□ 0.04
CPSF4-209ENST00000465132 ARID1AO14497 2285 aa15.28■□□□□ 0.04
CPSF4-209ENST00000465132 TRIM64A6NGJ6 449 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms