RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 SUPT7LO94864 414 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 TNFRSF6BO95407 300 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 LGI1O95970 557 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 HMGN2P05204 90 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 PPIAL4FP0DN26 164 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 UBL4AP11441 157 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 OMGP23515 440 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 ARR3P36575 388 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 ASMTP46597 345 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 CCR4P51679 360 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 SLC35A1P78382 337 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 NAB1Q13506 487 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 SLC9A3R2Q15599 337 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 NDUFAF6Q330K2 333 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 MMEL1Q495T6 779 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 VAX1Q5SQQ9 334 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.84□□□□□ -1.63
NUP188-202ENST00000464729 OTUD3Q5T2D3 398 aaPredicted RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 FAM219BQ5XKK7 198 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 ASPHD2Q6ICH7 369 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 SLC16A12Q6ZSM3 486 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 C18orf65Q6ZTR6 163 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 SZRD1Q7Z422 152 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 CCDC36Q8IYA8 594 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 TMCO5AQ8N6Q1 288 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 KIR3DL3Q8N743 410 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 ZNF614Q8N883 585 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 SPC24Q8NBT2 197 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 FAM110DQ8TAY7 271 aaPredicted RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 CDS1Q92903 461 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 POP5Q969H6 163 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 CHMP6Q96FZ7 201 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 EGLN2Q96KS0 407 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 MS4A4EQ96PG1 132 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 CITED1Q99966 193 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 RBM4BQ9BQ04 359 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 MRPL57Q9BQC6 102 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 CCDC106Q9BWC9 280 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 MRPL37Q9BZE1 423 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 ZNF385DQ9H6B1 395 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 CTPS2Q9NRF8 586 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 LIN7CQ9NUP9 197 aaKnown RBP4.84□□□□□ -1.63
NUP188-202ENST00000464729 ZNF69Q9UC07 566 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 CHRNA9Q9UGM1 479 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 TIMM22Q9Y584 194 aa4.84□□□□□ -1.63
NUP188-202ENST00000464729 AGAP5A6NIR3 686 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 ZNF587BE7ETH6 402 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 TBX19O60806 448 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 SKAP2O75563 359 aaPredicted RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 IGHV2-5P01817 119 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CRYBA1P05813 215 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 IMPDH1P20839 514 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 STX2P32856 288 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 GLRXP35754 106 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 RBMXP38159 391 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 FRKP42685 505 aaPredicted RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 CRYBB2P43320 205 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 RAD52P43351 418 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 HTR3AP46098 478 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 MTNR1AP48039 350 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 ATP4BP51164 291 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 SELENOVP59797 346 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 TUBA1BP68363 451 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CALCOCO2Q13137 446 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 SKP2Q13309 424 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 SNTB2Q13425 540 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 ZNF141Q15928 474 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 TAF9Q16594 264 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 UNC50Q53HI1 259 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 DCST2Q5T1A1 773 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 AP1ARQ63HQ0 302 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 OLFML2AQ68BL7 652 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 TMEM225Q6GV28 225 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 KRT80Q6KB66 452 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 NOXRED1Q6NXP6 359 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CDC73Q6P1J9 531 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 PAQR6Q6TCH4 344 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 GPRIN3Q6ZVF9 776 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 TUBA1AQ71U36 451 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 GRINAQ7Z429 371 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 FAM185AQ8N0U4 392 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 PRR26Q8N8Z3 221 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 ZNF563Q8TA94 476 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 GTF3AQ92664 365 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 RAB8BQ92930 207 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CIDECQ96AQ7 238 aaPredicted RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 FAM120BQ96EK7 910 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 DNAJA3Q96EY1 480 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 OTUB1Q96FW1 271 aaPredicted RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 METTL2AQ96IZ6 378 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 ZNF385AQ96PM9 386 aaKnown RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 ZNF382Q96SR6 550 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 SDF2Q99470 211 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 OR11A1Q9GZK7 315 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CRLF2Q9HC73 371 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 POLR3HQ9Y535 204 aaPredicted RBP4.83□□□□□ -1.64
NUP188-202ENST00000464729 KCNE3Q9Y6H6 103 aa4.83□□□□□ -1.64
NUP188-202ENST00000464729 CLPSL1A2RUU4 121 aa4.82□□□□□ -1.64
NUP188-202ENST00000464729 A8MT66 165 aa4.82□□□□□ -1.64
NUP188-202ENST00000464729 RPL36A-HNRNPH2H7BZ11 118 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms