RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 AP2A1O95782 977 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 CST1P01037 141 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 CLTAP09496 248 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 ZNF24P17028 368 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 MAGP20916 626 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 GSTM3P21266 225 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 RRM2P31350 389 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 RPL13AP40429 203 aaKnown RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 VDAC2P45880 294 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 ACLYP53396 1101 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 UBE2IP63279 158 aaKnown RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 TNNC1P63316 161 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 MRPS15P82914 257 aaKnown RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 GGTLC2Q14390 218 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 GPR176Q14439 515 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 ALKBH6Q3KRA9 238 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 SFT2D3Q587I9 215 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 PIGGQ5H8A4 983 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 RHEBL1Q8TAI7 183 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 NDNFQ8TB73 568 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 TIMD4Q96H15 378 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 LLPHQ9BRT6 129 aaKnown RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM175Q9BSA9 504 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 NSRP1Q9H0G5 558 aaKnown RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 GAL3ST2Q9H3Q3 398 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 LRRN3Q9H3W5 708 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 FBXO44Q9H4M3 255 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 REEP4Q9H6H4 257 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 RBAKQ9NYW8 714 aaPredicted RBP3.54□□□□□ -1.84
PTCD3-205ENST00000464541 VANGL2Q9ULK5 521 aa3.54□□□□□ -1.84
PTCD3-205ENST00000464541 BRD4O60885 1362 aaPredicted RBP3.53□□□□□ -1.84
PTCD3-205ENST00000464541 SMCO2A6NFE2 343 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TNFSF13O75888 250 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 OR2F2O95006 317 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 ETS2P15036 469 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NCK1P16333 377 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 GTF2E2P29084 291 aaKnown RBP3.53□□□□□ -1.84
PTCD3-205ENST00000464541 FMO3P31513 532 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 GPR4P46093 362 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 RFX3P48380 749 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 CASP4P49662 377 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 MNAT1P51948 309 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 ATP1B3P54709 279 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 XIAPP98170 497 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 C1orf61Q13536 156 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NCF4Q15080 339 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 C1orf220Q5T0J3 134 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 CLEC6AQ6EIG7 209 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TTC23LQ6PF05 361 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM220Q6QAJ8 160 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 HSDL2Q6YN16 418 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NUDCD3Q8IVD9 361 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 GATSQ8NAP1 163 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 FNDC5Q8NAU1 212 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 MFSD9Q8NBP5 474 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM104Q8NE00 496 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 PROKR2Q8NFJ6 384 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 FANK1Q8TC84 345 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 FGF11Q92914 225 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TMEM246Q9BRR3 403 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NAT9Q9BTE0 207 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 TEKT3Q9BXF9 490 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NDEL1Q9GZM8 345 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 HDHD2Q9H0R4 259 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 OR52A5Q9H2C5 316 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 ANKRA2Q9H9E1 313 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 NT5MQ9NPB1 228 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 CCNB1IP1Q9NPC3 277 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 DYRK4Q9NR20 520 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 PXMP2Q9NR77 195 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 CCL28Q9NRJ3 127 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 AHSPQ9NZD4 102 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 FLVCR2Q9UPI3 526 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 CBY1Q9Y3M2 126 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 RHBDD3Q9Y3P4 386 aa3.53□□□□□ -1.84
PTCD3-205ENST00000464541 GSTTP1A0A1W2PQM5 241 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 IQCF5A8MTL0 148 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SERPINE3A8MV23 424 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 A8MXQ7 604 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 MBTPS2O43462 519 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CDK14O94921 469 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 KLHL2O95198 593 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 HOXB8P17481 243 aaPredicted RBP3.52□□□□□ -1.85
PTCD3-205ENST00000464541 GCAP28676 217 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CD1CP29017 333 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 IL12AP29459 219 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 DDOSTP39656 456 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 UQCRFS1P47985 274 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CCR6P51684 374 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 EFNB2P52799 333 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 PLTPP55058 493 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 PLP1P60201 277 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 CTAG1AP78358 180 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 VGLL4Q14135 290 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 RCAN2Q14206 197 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SLC15A2Q16348 729 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 MARCH8Q5T0T0 291 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 OR2G6Q5TZ20 316 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 SPECC1LQ69YQ0 1117 aa3.52□□□□□ -1.85
PTCD3-205ENST00000464541 OR52E8Q6IFG1 317 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms