RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 SPOCK1Q08629 439 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 KEAP1Q14145 624 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 ETFDHQ16134 617 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 SLC36A2Q495M3 483 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF672Q499Z4 452 aaPredicted RBP12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 SLC35F1Q5T1Q4 408 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 PAMR1Q6UXH9 720 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 SLC16A14Q7RTX9 510 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 JAZF1Q86VZ6 243 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 OR8D4Q8NGM9 314 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 OR4K13Q8NH42 304 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 FGFBP3Q8TAT2 258 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 NEUROG1Q92886 237 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 NINJ1Q92982 152 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 TSSK6Q9BXA6 273 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 SYT4Q9H2B2 425 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 KCNN2Q9H2S1 579 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 TBC1D23Q9NUY8 699 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 PLEKHA6Q9Y2H5 1048 aa12.63□□□□□ -0.39
SQSTM1-205ENST00000464493 A0A1W2PPL8 197 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 SLC16A7O60669 478 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 SOX14O95416 240 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 RAB36O95755 333 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 CRYAAP02489 173 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 RAF1P04049 648 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 TP53P04637 393 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 CELA3BP08861 270 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 CTLA4P16410 223 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 DNASE1P24855 282 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 GIPRP48546 466 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 IDH3GP51553 393 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 NPRL3Q12980 569 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 FAM27BQ5VT28 67 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 LEG1Q6P5S2 330 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 C20orf204Q6ZNR8 217 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 FOXL2NBQ6ZUU3 175 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 AMIGO2Q86SJ2 522 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 C10orf67Q8IYJ2 551 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF611Q8N823 705 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 ATG16L2Q8NAA4 619 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 IL17RDQ8NFM7 739 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 OR5K1Q8NHB7 308 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 PYDC1Q8WXC3 89 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 LRTOMTQ8WZ04 291 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 NABP1Q96AH0 204 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF75AQ96N20 296 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 SNX18Q96RF0 628 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 NMNAT3Q96T66 252 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 KCNS3Q9BQ31 491 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 NUAK2Q9H093 628 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 RERGLQ9H628 205 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 RNF121Q9H920 327 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 NOX3Q9HBY0 568 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 CISD1Q9NZ45 108 aaKnown RBP12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 REV1Q9UBZ9 1251 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 POU2F3Q9UKI9 436 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 MOKQ9UQ07 419 aa12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 RAI1Q7Z5J4 1906 aaPredicted RBP12.62□□□□□ -0.39
SQSTM1-205ENST00000464493 DSCAMO60469 2012 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 G3V2T6 193 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 H3BN98 237 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 KHDRBS3O75525 346 aaKnown RBP12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 ATE1O95260 518 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 RENP00797 406 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 ZNF14P17017 642 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 LAP3P28838 519 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 CRABP1P29762 137 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 CDH11P55287 796 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 NAAAQ02083 359 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 SLC36A3Q495N2 470 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 MYPOPQ86VE0 399 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 LNX2Q8N448 690 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 SDR9C7Q8NEX9 313 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 OR2T33Q8NG76 320 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 OR52E2Q8NGJ4 325 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 TEX47Q8TBZ9 253 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 SRA1Q9HD15 236 aaKnown RBP12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 FBXL3Q9UKT7 428 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 COA3Q9Y2R0 106 aaPredicted RBP12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 ATP23Q9Y6H3 246 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 PLCE1Q9P212 2302 aa12.61□□□□□ -0.39
SQSTM1-205ENST00000464493 CREBBPQ92793 2442 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CCDC168Q8NDH2 2452 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 OR6C68A6NDL8 312 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 E7EQL1 145 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 ATP6V1G2-DDX39BF2Z307 99 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 SERPINA5P05154 406 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 OSMP13725 252 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CD53P19397 219 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 POU1F1P28069 291 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 CALCRP30988 508 aa12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 GABPB1Q06547 395 aaPredicted RBP12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.6□□□□□ -0.39
SQSTM1-205ENST00000464493 RAB39AQ14964 217 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms