RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 A6NIZ1 184 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 ATP6V1G2-DDX39BF2Z307 99 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 H0YHG0 523 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 SLC2A10O95528 541 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 TXNDC12O95881 172 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 CECR9P0C854 216 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 DANCRP0C864 163 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 PATE4P0C8F1 98 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 OSMP13725 252 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 IDH3GP51553 393 aaPredicted RBP14.82□□□□□ -0.04
VPS52-215ENST00000464425 RPS6KA3P51812 740 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 RAP1BP61224 184 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 RAP1AP62834 184 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 PPP2R2BQ00005 443 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 CD47Q08722 323 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 PGGHGQ32M88 737 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 SPNS3Q6ZMD2 512 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 ZNF627Q7L945 461 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 SKA3Q8IX90 412 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 ARIH2OSQ8N7S6 290 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 OR52L1Q8NGH7 329 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 TMEM171Q8WVE6 324 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 NSMAFQ92636 917 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 PERPQ96FX8 193 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 RBM4BQ9BQ04 359 aaKnown RBP14.82□□□□□ -0.04
VPS52-215ENST00000464425 KCNS3Q9BQ31 491 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 C9orf16Q9BUW7 83 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 RBM4Q9BWF3 364 aaKnown RBP14.82□□□□□ -0.04
VPS52-215ENST00000464425 EGLN3Q9H6Z9 239 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 NOX3Q9HBY0 568 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 PAPOLBQ9NRJ5 636 aaKnown RBP14.82□□□□□ -0.04
VPS52-215ENST00000464425 TMEM38BQ9NVV0 291 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 B3GNT2Q9NY97 397 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 CRNNQ9UBG3 495 aaPredicted RBP14.82□□□□□ -0.04
VPS52-215ENST00000464425 IL20RAQ9UHF4 553 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 ADAM18Q9Y3Q7 739 aa14.82□□□□□ -0.04
VPS52-215ENST00000464425 SAC3D1A6NKF1 404 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 AHCYL1O43865 530 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 IGKV3-15P01624 115 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 IGLV1-44P01699 117 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 PAX7P23759 505 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 SDHAP31040 664 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 ARR3P36575 388 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 FMODQ06828 376 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 MYPOPQ86VE0 399 aaPredicted RBP14.81□□□□□ -0.04
VPS52-215ENST00000464425 SLC22A24Q8N4F4 322 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 FAM169BQ8N8A8 192 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 ZNF519Q8TB69 540 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 FNDC8Q8TC99 324 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 IGFBPL1Q8WX77 278 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 KCNK17Q96T54 332 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 CIB1Q99828 191 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 SH3GL3Q99963 347 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 IFT27Q9BW83 186 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 PLA2G12AQ9BZM1 189 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 CXorf56Q9H5V9 222 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 SMURF2Q9HAU4 748 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 KRT84Q9NSB2 600 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 USE1Q9NZ43 259 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 ZNF224Q9NZL3 707 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 ENOPH1Q9UHY7 261 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 BAIAP2Q9UQB8 552 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 IER3IP1Q9Y5U9 82 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 PLCE1Q9P212 2302 aa14.81□□□□□ -0.04
VPS52-215ENST00000464425 MAP1AP78559 2803 aaPredicted RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 IGKV1D-43A0A0B4J1Z2 117 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 H7C1C5 153 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 BHLHE40O14503 412 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 ARHGEF9O43307 516 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 CRYAAP02489 173 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 OR8G3PP0DMU2 310 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 CDAP32320 146 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 GIPRP48546 466 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 PTDSS1P48651 473 aaKnown RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 FABP6P51161 128 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 ZNF84P51523 738 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 LCN6P62502 163 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 ESRRGP62508 458 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 NKX6-1P78426 367 aaPredicted RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 NAAAQ02083 359 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 GSG1Q2KHT4 349 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 SLC36A3Q495N2 470 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 LNX2Q8N448 690 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 OR2T33Q8NG76 320 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 OR8D4Q8NGM9 314 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 FGFBP3Q8TAT2 258 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 TEX47Q8TBZ9 253 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 NANOS1Q8WY41 292 aaKnown RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 NMD3Q96D46 503 aaKnown RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 Q96M85 177 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 ERMAPQ96PL5 475 aaPredicted RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 RBP7Q96R05 134 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 DHRS9Q9BPW9 319 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 ALG12Q9BV10 488 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 MOV10Q9HCE1 1003 aaKnown RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 TBC1D23Q9NUY8 699 aa14.8□□□□□ -0.04
VPS52-215ENST00000464425 TMEFF2Q9UIK5 374 aaPredicted RBP14.8□□□□□ -0.04
VPS52-215ENST00000464425 H3BN98 237 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 MGRN1O60291 552 aa14.79□□□□□ -0.04
VPS52-215ENST00000464425 FARS2O95363 451 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms