RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 RAD52P43351 418 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 UCP2P55851 309 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 TMEM33P57088 247 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 LIPEQ05469 1076 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 PRKCDQ05655 676 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 THEM4Q5T1C6 240 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 FAM27BQ5VT28 67 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 FOXL2NBQ6ZUU3 175 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 CBLL1Q75N03 491 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 LINC01356Q8N9X3 169 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 GEMIN6Q8WXD5 167 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 NKIRAS2Q9NYR9 191 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 DUSP13Q9UII6 198 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 GPR160Q9UJ42 338 aa17.6■□□□□ 0.41
PDLIM4-205ENST00000463615 FBN3Q75N90 2809 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 IGKV1D-43A0A0B4J1Z2 117 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 LYNX1G3V0Z9 82 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 CXCR6O00574 342 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 NME4O00746 187 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 NDUFAB1O14561 156 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 FFAR1O14842 300 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 PRSS23O95084 383 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SLC2A10O95528 541 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 LYNX1P0DP58 116 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SRD5A1P18405 259 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 HNF1AP20823 631 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 FUT4P22083 530 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 APEX1P27695 318 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 IL2RGP31785 369 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SLC9A3P48764 834 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 CDH15P55291 814 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SELENOVP59797 346 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 RPL27P61353 136 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 MAD2L1BPQ15013 274 aaPredicted RBP17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 TRAM2Q15035 370 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 HSP90B2PQ58FF3 399 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 VTCN1Q7Z7D3 282 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 CPEB3Q8NE35 698 aaKnown RBP17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 KCNN2Q9H2S1 579 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 EFCAB1Q9HAE3 211 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SLCO1C1Q9NYB5 712 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 SNX13Q9Y5W8 968 aa17.59■□□□□ 0.41
PDLIM4-205ENST00000463615 A0A1W2PPW3 197 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 ICMTO60725 284 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 FAM157BP0CG42 384 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 CCL2P13500 99 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 MAKP20794 623 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 KLF3P57682 345 aaPredicted RBP17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 TRIP10Q15642 601 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 PCGF3Q3KNV8 242 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 IFI44LQ53G44 452 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 PABPC1L2AQ5JQF8 200 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 PHC2Q8IXK0 858 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 NRMQ8IXM6 262 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 C1orf174Q8IYL3 243 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 LRRC18Q8N456 261 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 SYNPRQ8TBG9 265 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 ACOT11Q8WXI4 607 aaPredicted RBP17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 C11orf40Q8WZ69 217 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 POM121L2Q96KW2 1035 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 RBP7Q96R05 134 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 SNX18Q96RF0 628 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 FNDC11Q9BVV2 318 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 ANKRD19PQ9H560 264 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 GMPR2Q9P2T1 348 aaKnown RBP17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 FZR1Q9UM11 496 aa17.58■□□□□ 0.4
PDLIM4-205ENST00000463615 A6NIZ1 184 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 C17orf100A8MU93 164 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 RP2O75695 350 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 NCR1O76036 304 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 CLPTM1O96005 669 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 IGHV3-13P01766 116 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 COL8A2P25067 703 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 CDAP32320 146 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 APLNRP35414 380 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 SLC7A2P52569 658 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 RAP1BP61224 184 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 RAP1AP62834 184 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 HSF2Q03933 536 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 FMODQ06828 376 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 CD47Q08722 323 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 MOGQ16653 247 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 CR1LQ2VPA4 569 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 TMPRSS11FQ6ZWK6 438 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 ZNF416Q9BWM5 594 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 HINT3Q9NQE9 182 aaKnown RBP17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 TAAR3PQ9P1P4 343 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 ABCD2Q9UBJ2 740 aa17.57■□□□□ 0.4
PDLIM4-205ENST00000463615 A0A087WUU8 490 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 J3KTA2 159 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 LCKP06239 509 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 CST2P09228 141 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 SAGP10523 405 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 NAT2P11245 290 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 ZNF32P17041 273 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 TCN1P20061 433 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 STOMP27105 288 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 GPR6P46095 362 aaPredicted RBP17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 GSK3BP49841 420 aa17.56■□□□□ 0.4
PDLIM4-205ENST00000463615 DVL1P1P54792 670 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms